Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g02352 ATGCCAGTTGCTAAACTCACGGCCTCTGGCTCTCCTGATGTCATGAAAACAGAAGACAGAAATGATTCTATAGATACCATCATCAGACAAGCAATTGGAAAGGAACCTTTCCTTTCTTTTCCTAGGGCTGGTGACAGCCCTGTACAATGGATTCAATTACTCCATGCTTTAGACCAGCAAGAACTTCCAGGGTGGCCTTTGCTTTCTCCTGTGAAGGTTCAGTTGCAGAAGTGTGACAAGTGTTCTCGAGAGTTTTGCTCTCCCATTAACCATAGAAGACATATGCGTGTACACCATCGATTGAAGAAGCTTGATAAGGATTCTAAGAAAAACCGAGATCTTCTAGGAGCTTATTGGGATAAGCTCTCTATAGAAGAGGCAAAAGAAGTTGTGTCATTCAAGAATGTAATGTTGGAGGAAGTTCCAGGGTCTTCAATTTTAAATGCTTTGGCAAGTCTGACTCAAAAACAAGGATTTTCTTCTCTTCCACAGTATTATCTTAAAGCTGGTTCTGCCCTTCTGGATATTGTCGAATCGAGGCCTTCAAGCTTTCCTATATCTTCCCAAGAGTTGTTCAGTATACTTGATGATTCCAGTGAAAAAACATTTTTGTGTGGGACAGCAGTGTCAATGCAAAGATATGTTTTTGATGGAGAGGCTGGAAAGATTGGTCTTGAACCAAAAAACATAGTTGCTTGCACTAGTTTCTTGGTAGAGCAGAAATTGGTGAAGGCATGGCTTGCAGACAAAGAAGCTGAAGCATTGAAGTGTCAGAAGCAGCTAGTTGAGGAGGAAGAAGCTGCTCAGAAAAGACAAGCTGAGATTTTGGAGAGGAAACGCCAGAAAAAGCTTAGACAAAAAGAACAGAAGGGGAGGGAACTGCTCGAAGATGACATTGAAATTAAACGGAACATCAATAGCACAGGAGAGGCTGTACTATCTGCAGAAACATCTTTGGATACGTGTGTCTTTGAAGCACATAATTCTGATACATTTGCAGATCATGCTTCTTCACCACATGCATCCGCCTGTCACTTTCCTGACATTTATGAAGGTGCTGAAAGGGAGACACACTCAGGGTATGAATGTGACACTGATCAAAATATTGAGCGACAAACATCCCACAGACATAGTCGTCGACGCATGATGGTTGCGAGACAGCAAGGACTGCCAAAATCACAGTGGGCTGTATCCAACTGTTTACATGCGAGCCCATATTCTCAATTATCAAAGCATGGAGTCATTCAGAGATATGGGACAAACCGGGATCAAAGAGTGACTTCTATTACTAATGGGATGAAAGTTTGGAGTCGAAAGCCTAAACCAGATATTGATGGGATGGTTTCAAAAGCCAGACTGCAAAAAGAACCAGACAAGGTTAAGAATCATGAAGTATTAATAGGATCTATATCTGTAACTCTAAGCAATTGCAGCCAATCAGTGGGTAGCCTTGTGGCATCTCATGGTGATGATATTGTGGAGAATCCGACAAAGCAGTGTACTGTACAGGAGAAGCCAGTGAAACCTGATTCTTCCCAGAGTAGCAACAACCCATTAACAGTGAAGTTTTGGCGGCCAATTGGCAAACATGGAACCAAAGACCCATTTCCACTTCAAAATGGTAGGGCTGGAGCTGAAGCTGATACTTATGAAAAAGAGGATCAAACTTTGTCAGGTCAAAGTAGTTTAAGGGTGTATAGTATAGATCATAGTGATATTGGTTTCGGGAACAAGTTTCCCGATTTTGGTGCTAAAGCATATCCAAGAAGCCTTTTCTCCAGACATGCTGCCAAAGCCTTTCTTGCACAAAGATGGAAAGAAGCTATTTCATCAAACCATGTGAAATTGTTATGCAGAGAATCAATTGCATGCAACCTCCGAAGTTACTAA 1890 0.418 MPVAKLTASGSPDVMKTEDRNDSIDTIIRQAIGKEPFLSFPRAGDSPVQWIQLLHALDQQELPGWPLLSPVKVQLQKCDKCSREFCSPINHRRHMRVHHRLKKLDKDSKKNRDLLGAYWDKLSIEEAKEVVSFKNVMLEEVPGSSILNALASLTQKQGFSSLPQYYLKAGSALLDIVESRPSSFPISSQELFSILDDSSEKTFLCGTAVSMQRYVFDGEAGKIGLEPKNIVACTSFLVEQKLVKAWLADKEAEALKCQKQLVEEEEAAQKRQAEILERKRQKKLRQKEQKGRELLEDDIEIKRNINSTGEAVLSAETSLDTCVFEAHNSDTFADHASSPHASACHFPDIYEGAERETHSGYECDTDQNIERQTSHRHSRRRMMVARQQGLPKSQWAVSNCLHASPYSQLSKHGVIQRYGTNRDQRVTSITNGMKVWSRKPKPDIDGMVSKARLQKEPDKVKNHEVLIGSISVTLSNCSQSVGSLVASHGDDIVENPTKQCTVQEKPVKPDSSQSSNNPLTVKFWRPIGKHGTKDPFPLQNGRAGAEADTYEKEDQTLSGQSSLRVYSIDHSDIGFGNKFPDFGAKAYPRSLFSRHAAKAFLAQRWKEAISSNHVKLLCRESIACNLRSY 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g02352 629 ProSiteProfiles Zinc finger C2H2 type domain profile. 76 103 IPR013087 -
Adu09g02352 629 Coils Coil 247 293 - -
Adu09g02352 629 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 619 - -
Adu09g02352 629 ProSitePatterns Zinc finger C2H2 type domain signature. 78 99 IPR013087 -
Adu09g02352 629 MobiDBLite consensus disorder prediction 531 554 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g02352 Adu-Chr9 110736556 110741847 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g02352 18 617 C2H2 Transcription Factor Family AT4G25610 45.950 3.68e-146 434
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Adu09g02352 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g02352 - - gmx:100799153 862.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g02352 09 110736556 110741847 Adu09g02352 09 110736556 110741847 ECH
Adu05g03399 05 106387030 106392318 Adu09g02352 09 110736556 110741847 PCT