Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g02280 ATGGCTGACCCTTACGGCCTCCCAGAGGATCTCCGGCGACTCATGTCCAACAGACCTCACTTCACCACTGCCACCGCCGCCGCTCCTTTCTTTCCTCTTCCGGAGAACCCACTCTCTCTCCACCACCACCACCACCTCCTCAATGCTCCTCCTCCACCACCGCCTCTCAACACCACCTACGACCCCATCATCATCAACAACGTCGTCGGCGACCTTTTCTTCCCTCGTTCTAATAACAACACCACCAGCGCCGCCTTCACCGCTCATCATCATCACTTCCCTCTCCATCACCACCACCACAACTCCACCAACAATTCCCCGTCTTCTTCTTCTCTCAACCCCACACCCCCGCCACCTCCTCCTCCTACTACTACTTCTGTCTCAGATCATCATCATCATCATGCATTCATGGCCGCCATGGACACTGCTTCTGCTGCTGCTGCTGCTGCATCCATGGACAAAGGATGGCTGGCCTTCGACACCGGCACCAACCGCTGGCCTCGGCAGGAGACTCTCTCCCTTCTTGAGATCAGATCTCGTCTTGATTCCAAGTTCAGAGAAAATAATCAAAAAGCTCCCTTGTGGAATGAGATTTCTAGGATAATGGCTGAGGAATTTGGGTACCAAAGGAGTGGGAAGAAATGCAAAGAGAAGTTTGAGAATTTGTACAAGTATTACAAGAAGACCAAGGAGGGAAAAGCTAGTAGACAAGATGGGAAACACTACAGATTCTTCAGGCAACTTGAAGCTATATGTGGTGGCAGCGGCGGCGGCAGCGGCGGAAGTGGTGGAGATTCATCAAACACTACTCATAATAATAATCTTCATGCCTTAGCGTCAAACACTGCTTCAGCTTCTGTTGCTGGTGCTAATGTTCAAACCCCAAGAAGCTTCAATGGTGATCATCAGAACAATAATAGCTTGATCAAGTGTTCAGAGAGCTTGAGTTTTTCGAACTCGTGTGAACTGGAGACATCGTCATCTGAGAACAATGATGAGGATCTTTCAGCCATTGCATACATGATGAAGCACTCCACATCTTCAAGGGACAACAATAATAACAAGCAGAAAGGGGTGCAATTGGATGATGATCATCATGGGGGAAGGGTGAGAAGAAGAAGAAGCTTGAGGGCAAAAGTGGAAGAGATAGTTGGTTCCCACATGAGGAAGATCATTGAGACACAAGATGCATGGATGGAGAGAATGGTGAGTGTTGTTGAGCAAAGGGAAAAGGAGATGGCATCCATGGAGGAAGAGAGGAAGAAGAAAGAGTCAATGAGGTTTGACCAAGAGGTAACGGAGCTTTGGGCAAAAGAGAGAGCTTGGGTTGAAGCAAGGGATGCTGCATTGATAGAAGTTGTAAGAAAACACATTGGAAATGGAAACAATAATAGCAATAATAATAAAGAGTTTGAGATTATTGAAGCATTGGCACCTCAAAGCAATAACAAGAGCAACAAGGGCCAAACTGCAAATAATAACAACAATAATGGTGGTGGTGGGAGGTGGAGTGAAATGGAGATATCAAACTTGATACAGTTGAGGACAGGGTTTGAAGAGAGAATGAGGGAGAATAATAATAATAATGGTGGAGGAGGGTATTATTTTGAGAGTAATAATAATAATAATAATAATAATGGGGTAAGTAGTGTTTGGGAAGAGATCTCAGGAAAATTGGGATGTTTGGGATTTGAGAGAAGTTCAGAAGAGTGTAAGCAGATTTGGGATGAGATCAGCATCTCACTTGGGAGGACAAATACTTCTGCTGCTGCTGCTGCTGTTGCCAAAACCAATAGGCCTTGGTGTTTGGAACTCAAGCTCACTGATGATGATGATGATGATGATGAACATCATCATGATCATGATGATCATCACATTTGA 1881 0.4567 MADPYGLPEDLRRLMSNRPHFTTATAAAPFFPLPENPLSLHHHHHLLNAPPPPPPLNTTYDPIIINNVVGDLFFPRSNNNTTSAAFTAHHHHFPLHHHHHNSTNNSPSSSSLNPTPPPPPPPTTTSVSDHHHHHAFMAAMDTASAAAAAASMDKGWLAFDTGTNRWPRQETLSLLEIRSRLDSKFRENNQKAPLWNEISRIMAEEFGYQRSGKKCKEKFENLYKYYKKTKEGKASRQDGKHYRFFRQLEAICGGSGGGSGGSGGDSSNTTHNNNLHALASNTASASVAGANVQTPRSFNGDHQNNNSLIKCSESLSFSNSCELETSSSENNDEDLSAIAYMMKHSTSSRDNNNNKQKGVQLDDDHHGGRVRRRRSLRAKVEEIVGSHMRKIIETQDAWMERMVSVVEQREKEMASMEEERKKKESMRFDQEVTELWAKERAWVEARDAALIEVVRKHIGNGNNNSNNNKEFEIIEALAPQSNNKSNKGQTANNNNNNGGGGRWSEMEISNLIQLRTGFEERMRENNNNNGGGGYYFESNNNNNNNNGVSSVWEEISGKLGCLGFERSSEECKQIWDEISISLGRTNTSAAAAAVAKTNRPWCLELKLTDDDDDDDEHHHDHDDHHI 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g02280 626 MobiDBLite consensus disorder prediction 286 305 - -
Adu09g02280 626 MobiDBLite consensus disorder prediction 95 130 - -
Adu09g02280 626 ProSiteProfiles Myb-like domain profile. 164 223 IPR001005 -
Adu09g02280 626 MobiDBLite consensus disorder prediction 356 374 - -
Adu09g02280 626 MobiDBLite consensus disorder prediction 346 374 - -
Adu09g02280 626 SMART sant 499 581 IPR001005 -
Adu09g02280 626 SMART sant 162 225 IPR001005 -
Adu09g02280 626 Pfam Myb/SANT-like DNA-binding domain 164 251 IPR044822 -
Adu09g02280 626 PANTHER TRIHELIX TRANSCRIPTION FACTOR PTL-LIKE 72 587 - -
Adu09g02280 626 MobiDBLite consensus disorder prediction 480 503 - -
Adu09g02280 626 CDD GT1 164 230 - -
Adu09g02280 626 MobiDBLite consensus disorder prediction 111 125 - -
Adu09g02280 626 PANTHER - 72 587 - -
Adu09g02280 626 Gene3D - 166 228 - -
Adu09g02280 626 Gene3D - 503 581 - -
Adu09g02280 626 Coils Coil 399 426 - -
Adu09g02280 626 MobiDBLite consensus disorder prediction 480 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g02280 Adu-Chr9 109065069 109067986 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g02280 165 579 Trihelix Transcription Factor Family AT5G03680 40.460 1.04e-78 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Adu09g02280 Myb_DNA-bind_4 5.9e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g02280 - - ahf:112711553 822.002