Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g02249 ATGGATGCATTGCTGGAATTTCAACAATGGCCTTTCAAAATTTCTTTTTCTTCTTTGGTGTTTCCGACTTCTCCACCGGTTCCTGAGTTGAGAGCTCAATTAAATTCAATTCACCACCGAAGTCATGGTTCAACGGTTGTGGCTTGTGGGAAGTTATTGGGGGAGCAGTTGAGACGAGGAGGCATGGATGAGATGGCAGTTCTTTCGTCATCGGATTCTCTTGCCACCAAGGACTATTATTTAGCCACGACGGGCAGCGGCCGTTCTGGCCAGGATGGACAACTTCAAGGAAGGCTGGATGCAGGAAATATCAAAGAAGCTGAATTGTCGTTGCGTGAGGCTGGCTGCTTGAATTATGAGGTATTTTCTATAGTAATGCTCTATCCTACCGTTCAGCAAAGGCACTTGTTGAGATGCAAAATTGGAGAGCATTATTGGAGAATGACCAGGTACCAATGGTCTAAAAAGCATGGTGAATTCTCCGACGAGGAAGACAGAATAATCTGCAGTCTTTATGCTAATATTGGAAGCAGATGGTCAATTATAGCAGCACAGTTGCCAGAAAGGACTGACAATGATATAAAGAACTATTGGAACACCAAGCTCAAGAAGAAGCTCATGGCTTTGCTTCCCAGTCATCATCATAATCAACAAAACCCACCACCATTCATTTCTGATTAA 681 0.4361 MDALLEFQQWPFKISFSSLVFPTSPPVPELRAQLNSIHHRSHGSTVVACGKLLGEQLRRGGMDEMAVLSSSDSLATKDYYLATTGSGRSGQDGQLQGRLDAGNIKEAELSLREAGCLNYEVFSIVMLYPTVQQRHLLRCKIGEHYWRMTRYQWSKKHGEFSDEEDRIICSLYANIGSRWSIIAAQLPERTDNDIKNYWNTKLKKKLMALLPSHHHNQQNPPPFISD 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g02249 226 Gene3D - 159 221 - -
Adu09g02249 226 SMART sant 156 204 IPR001005 -
Adu09g02249 226 Pfam Myb-like DNA-binding domain 158 200 IPR001005 -
Adu09g02249 226 PANTHER MYB DNA-BINDING DOMAIN SUPERFAMILY PROTEIN-RELATED 156 216 - -
Adu09g02249 226 SUPERFAMILY Homeodomain-like 151 206 IPR009057 -
Adu09g02249 226 CDD SANT 159 200 IPR001005 -
Adu09g02249 226 ProSiteProfiles Myb-like domain profile. 152 202 IPR001005 -
Adu09g02249 226 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 154 206 IPR017930 -
Adu09g02249 226 PANTHER OS09G0431300 PROTEIN 156 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g02249 Adu-Chr9 108241110 108243083 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g02249 156 219 MYB Transcription Factor Family AT4G37780 71.875 1.16e-24 97.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Adu09g02249 Myb_DNA-binding 9e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g02249 K09422 - adu:107466701 134.806