Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g02223 ATGCAGATAGCGGAGGCGGAGAGGCGGCAAGGCAGCGAGGTTGCGAAGCAGAGGCGGAAGCGGCGAGGCGGCGAGacgcgcttccgccgccgtttgtttgccgttcacgttcgcCTCTTCGTTCAGCCGTCGTCTTCCTTCGCGTTCTTCGCCGTTCGCAGTCGCTCGGCGTTCACCGTTCGCGTTCACTCGCCGTTCACTGTTCGAGTTCGCATTATAGCGTTCGTCTGGAAGCCACGTTGCTCTCCTTCAAACTCTGCGACCAACCCGCGCGCTCCACCTAGCTGTCGAAATTGCTCTCTTTTGTCGCCCGCCCAGCTAGAATACAAATGGCGAATGGCTTTCTCTACCGAAGAAATTGTTCGGACGTATGGGCTATTGTTGTCAGAACTCACCTCCAATGTGAATCCCATCATTACCGATCTCACTATCATTGCTGGCCAGCAGAGGAAACACGCCAAGGGCATCGCCGATGCCATTTGCAACCGGATTCTTGAGGTGCCTGCTGATAAAAAACTTCCTTCTCTCTATCTTCTGGACAGCATTGTGAAGAATTTTGGCCAGGAATATGTTAAATACTTCTCTTTACGTCTACCTCAAGTTTACTGTGAGGCATACAGACAGGTCCAGCCTAATCTACATTCTGTTCTGCAACGTCTCATTGCACATGTTATTAAACCACAATCCTTGCAGCAGATGGAACACTATAGTTCAATTATGGATATTGTTGGTGGTGATCGGTTGGACTCAACGGGAACTGTAGGTAATACAAGAGAAGGAGGGTTGAATGAATGGCAGCAAAAGAGATTTTCTAGTGATGGTTGGAACATATTCCAAACTTCCAAGACTTATAATCTCAATGATGAACAACGACGTCAAAGTCCAAGAGCTCTTATTGAGGCATATGGTTGTGACAAAGGCCGTGAAATTCCTAGTACTAAGCTTTTGTTTGTGGAGCAGCAGCCTGGCAGAAATGGTTTAGGGAGCAAGTTTCCATTGGCATCATGGCAGCACACTGAAGAAGAGGAGTTTGATTGGAAAGATATGAATCCAGGATTAGTAGACTGTAGTAGAAACAGCAGTTCTATGCAATCAAGTGTTAGATTCTCCAGGAAAAGGAAGTTATCTAATGATCTATCTAATTCTTCACATTACCCGTTCAATATGGGGGCTGCTTCCCCTGCTTTCAATGCTCATGCTACTCGTCCTTCCGGCTTGAATCCAGCATTTCCATTGCAAAAACGTCCTAGGAGTCTGCTTGAACCAATAAACATTAATAATAACACCAATGTGGGTCATGGTCCAAATAGAACTCTGTTTATACATGACCAGTTGCCTAATCAACCTGGACCAATTTCCTCTAACCTGCAAAATCATGGACAAGCACCTCAACTACAGTTTCTTCCACCTCAAGTTCCATCTTCAACACAAATTAGTCATGGGAGCTCTTTGCATTTACATGGGGGAACCTTGCCACTTTACGTCCAAGCCTCCCAACTGCTCCATCACAAATGA 1515 0.4495 MQIAEAERRQGSEVAKQRRKRRGGETRFRRRLFAVHVRLFVQPSSSFAFFAVRSRSAFTVRVHSPFTVRVRIIAFVWKPRCSPSNSATNPRAPPSCRNCSLLSPAQLEYKWRMAFSTEEIVRTYGLLLSELTSNVNPIITDLTIIAGQQRKHAKGIADAICNRILEVPADKKLPSLYLLDSIVKNFGQEYVKYFSLRLPQVYCEAYRQVQPNLHSVLQRLIAHVIKPQSLQQMEHYSSIMDIVGGDRLDSTGTVGNTREGGLNEWQQKRFSSDGWNIFQTSKTYNLNDEQRRQSPRALIEAYGCDKGREIPSTKLLFVEQQPGRNGLGSKFPLASWQHTEEEEFDWKDMNPGLVDCSRNSSSMQSSVRFSRKRKLSNDLSNSSHYPFNMGAASPAFNAHATRPSGLNPAFPLQKRPRSLLEPININNNTNVGHGPNRTLFIHDQLPNQPGPISSNLQNHGQAPQLQFLPPQVPSSTQISHGSSLHLHGGTLPLYVQASQLLHHK 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g02223 504 Pfam CID domain 135 221 IPR006569 -
Adu09g02223 504 ProSiteProfiles CID domain profile. 116 294 IPR006569 -
Adu09g02223 504 CDD CID_Pcf11 121 220 - -
Adu09g02223 504 PANTHER PRE-MRNA CLEAVAGE COMPLEX II 114 424 IPR045154 GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379
Adu09g02223 504 SMART 558neu5 119 238 IPR006569 -
Adu09g02223 504 PANTHER POLYADENYLATION AND CLEAVAGE FACTOR HOMOLOG 4 114 424 - -
Adu09g02223 504 MobiDBLite consensus disorder prediction 1 22 - -
Adu09g02223 504 Gene3D - 112 235 IPR008942 -
Adu09g02223 504 MobiDBLite consensus disorder prediction 358 379 - -
Adu09g02223 504 SUPERFAMILY ENTH/VHS domain 116 222 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g02223 Adu-Chr9 107775246 107784608 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g02223 116 367 C2H2 Transcription Factor Family AT4G04885 36.391 1.82e-49 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g02223 K14400 - aip:107640327 473.011