Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g02222 ATGACAAGTCAACCACCACCTACATATCTTGATTTGATTAGTTCACTAGTGAATCATGGTGTGATCTCGGTAACCAATCCACCTACCGGACTGGATTCCATTGGGACGGAGTTCGATCCAGATATCTTGAAGGTTCGTCATGAAGGTGTAATCAGTGCCTTATACAGTGATCTTCCTAGACAATGCACGAGCTGCGGTCTCCGATTCAAAAGGCAAGATGAGCACAGTAGACATATGGATTGGCACGTGACTAGGAACCGAATGTCAAAAAGCCGGAAGCAAAAGGGGTCTCAAAAGTGGTTTGCAAGTGGGAGCCTGTGGCTAAGTGGTGCAGAGGCTTCGGGAAAGGAATCGATTCCAGGGTCGCTGGCTCCCGAAGAGACAGAGGAAATGAAAGACGAAATGGATGAGTGGATGTATAGAGGAGCCACATACCTTAAGGCACCCACGGGAACAACATTGGCCACCATGGACAGACATCAACTAGGGCCCATTGTTCATTCCAAATGCAGATCTGACTCTGACTCTACTATGCCCTCAACCAACAGGAAACCTACCAAGAGAGTAGTAAGAGAAAAAGAATGCGGATCTAAGCTCCACACTATTCAAACCCCTTTCTCCTTCATTTCTCTTCCCATTTTGGATCTGAACTTGTTCTTCTTCCCTCTTCTCTCCACGCATGCATTAGCCCTAACCTCATCTCAGAGGAGATCGCTAGTTTCCATTGGAGAAGATGCTGACTAA 744 0.4677 MTSQPPPTYLDLISSLVNHGVISVTNPPTGLDSIGTEFDPDILKVRHEGVISALYSDLPRQCTSCGLRFKRQDEHSRHMDWHVTRNRMSKSRKQKGSQKWFASGSLWLSGAEASGKESIPGSLAPEETEEMKDEMDEWMYRGATYLKAPTGTTLATMDRHQLGPIVHSKCRSDSDSTMPSTNRKPTKRVVREKECGSKLHTIQTPFSFISLPILDLNLFFFPLLSTHALALTSSQRRSLVSIGEDAD 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g02222 247 PANTHER PRE-MRNA CLEAVAGE COMPLEX II 5 175 IPR045154 GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379
Adu09g02222 247 MobiDBLite consensus disorder prediction 167 192 - -
Adu09g02222 247 MobiDBLite consensus disorder prediction 170 184 - -
Adu09g02222 247 PANTHER POLYADENYLATION AND CLEAVAGE FACTOR HOMOLOG 4 5 175 - -
Adu09g02222 247 ProSitePatterns Zinc finger C2H2 type domain signature. 62 82 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g02222 Adu-Chr9 107767534 107775219 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g02222 2 175 C2H2 Transcription Factor Family AT4G04885 51.724 1.57e-63 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Adu09g02222 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g02222 K14400 - ahf:112721559 285.804