Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g02220 ATGGTTGCTGAGACATCTGATGATGGGTCCAAGTGGGGGCATGTGAAAAAGGGAACTTGCTGCGTTTGTTGCGATAACCATATCGATTCACTTCTGTATAGATGCGGGCACATGTGCACTTGCTCAAAATGTGCCAATGAGTTAGTTCGTGGCGGAGGTAAGTGTCCTTTATGCCGAGCACCGATTGTTGAGGTGGTCCGAGCATATTCCATACTGTAA 219 0.4749 MVAETSDDGSKWGHVKKGTCCVCCDNHIDSLLYRCGHMCTCSKCANELVRGGGKCPLCRAPIVEVVRAYSIL 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g02220 72 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 3 70 IPR013083 -
Adu09g02220 72 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 3 72 - -
Adu09g02220 72 SUPERFAMILY RING/U-box 14 65 - -
Adu09g02220 72 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 3 72 - -
Adu09g02220 72 Pfam Zinc finger, C3HC4 type (RING finger) 17 64 - -
Adu09g02220 72 ProSiteProfiles Zinc finger RING-type profile. 20 59 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g02220 Adu-Chr9 107705470 107705937 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g02220 20 66 C3H Transcription Factor Family AT3G06140 42.553 5.70e-10 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g02220 - - gmx:100805607 159.458