Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g02200 ATGTCAGGAATGGAAATTTGGCCAGCCGAAGACGAATCTAGTGAGTCTCTACCACCATTCAATAACAGGAGTGGCTACGATTCGAGAACTGGCATCTACCGCTCTCTTGTTAGACTTGGCACCAAGCATGAGATCCCAACAAAGCCTGATCTCAATGTTGCCCATCTCGTGCTATCACAGTTCCCACAAGGAGACCTTGCAGAGGCAAGAATAGCATTCGTTGATGCAGCAACTGATAAGAGTTTGAGTTATGGCGAGGTACGTAGATCGGTATACTCCCTCGCATCAGCCTTGTTCCATGGACTTGGGGTTAGGAAAGGGGATGTGCTGTTTCTCCTATCCCCTAACTCAATCCTGTTCCCAACCATATGTCTAGCCGTGTTATCAATTGGTGCAGTTCTTACCACTGCCAACCCTCTTAATACCGAGTCAGAAATCGCCAAGCAGGTACGCGACTCAGGTGCTAAACTAGCCATCTCAGCACCGGAGGAGCTACACAAATTTGTCTCAACTGGGGTGCCTATAATGCTCACATATTGTCCATCTAACAGCGGAATGCTATCAGTTGAAGAGTTGATAGAAGGCTGCTCTTGTTCTCTGGAGTTGCCGCAGGTTACTGTGGTTCAATCAGACCCTGCTGCTATACTTTACTCCTCAGGGACTACTGGGGTAAGTAAAGGTGTAGTTTTGACACACCAGAATCTCATTTCCACACTGAAACTTCTCTTCTGGTCTGTTGATGTAAGTGCATCTTCAGATGATGTCTTCTTGGCCTTCATTCCGATGTTTCATGTCTACGGCCTGGTTTTCTTTGGATTAGGAATGCTGTGTGTTGGTGTTAAGATAATTGTGATGCAGAAATTTGACTTCCAAGCTATGCTTCTTGCTATTCAGAAGCACAAAGTTAATAACTTACCGGCAGTGCCACCAGTGATCCTTGCACTAGTGAAATATGCAAGCAAAGCTGGTTGTGACTTGTCCAGCCTCCAAAGGACGGGTACAGGTGCTGCGCCTTTGAGTAAGGAAGTGTCACGGGAGTTCAGAAAAATGTTTCCATGGGTTGAACTAAGGCAAGGTTATGGCCTAACAGAAAGCTCAGCTGCAGCTACCTTTCTTGTGTCAGAGAGGGATGCTAAAGCTCGGCCAGACTCATGCGGCCAGTTGCTTCCAACCTTTTGTGCAAAGGTGGTAGACATTGATACCGGAAAGCCTTTGCCTCCTCAAAAGAAAGGAGAGCTGTGGCTGAAAAGTACTACTATTATGAAAGAGTATCTGGGAAATTCGGAGGCAACAACCCTAACAGTTGATTCAGATGGCTGGCTAAAGACAGGTGATCTCAGTTACATTGATGAAAGTGGATTTGTTTATATAGTTGAACGGATAAAGGAGCTGATCAAGCACAATGGATATCAGGTGGCTCCTGCAGAACTGGAGTCTTTATTGCTAAGCCATCCCCTTATTGTTGATGCAGCTGTTATACCGGTTGAAGATGAAGCAACTGGACAGATACCAATGGCCTATGTTGTGAGAGCAGCTGGTTCTGAACTCTCAGAAGACCAAGTCATTCAATTTGTTGCAGGCCAGGTGGCTCCATATAAGAAAGTGAGAAGGGTGAGTTTCATTGAAACTATTCCAAGGTCAGCAGCTGGCAAGATATTGCGCAAGGACCTCGTTTCTCTAAGCAGACAACAACTTGTCTCCAAGTTATGA 1710 0.4579 MSGMEIWPAEDESSESLPPFNNRSGYDSRTGIYRSLVRLGTKHEIPTKPDLNVAHLVLSQFPQGDLAEARIAFVDAATDKSLSYGEVRRSVYSLASALFHGLGVRKGDVLFLLSPNSILFPTICLAVLSIGAVLTTANPLNTESEIAKQVRDSGAKLAISAPEELHKFVSTGVPIMLTYCPSNSGMLSVEELIEGCSCSLELPQVTVVQSDPAAILYSSGTTGVSKGVVLTHQNLISTLKLLFWSVDVSASSDDVFLAFIPMFHVYGLVFFGLGMLCVGVKIIVMQKFDFQAMLLAIQKHKVNNLPAVPPVILALVKYASKAGCDLSSLQRTGTGAAPLSKEVSREFRKMFPWVELRQGYGLTESSAAATFLVSERDAKARPDSCGQLLPTFCAKVVDIDTGKPLPPQKKGELWLKSTTIMKEYLGNSEATTLTVDSDGWLKTGDLSYIDESGFVYIVERIKELIKHNGYQVAPAELESLLLSHPLIVDAAVIPVEDEATGQIPMAYVVRAAGSELSEDQVIQFVAGQVAPYKKVRRVSFIETIPRSAAGKILRKDLVSLSRQQLVSKL 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g02200 569 Pfam AMP-binding enzyme C-terminal domain 476 551 IPR025110 -
Adu09g02200 569 Gene3D - 463 566 IPR045851 -
Adu09g02200 569 ProSitePatterns Putative AMP-binding domain signature. 215 226 IPR020845 -
Adu09g02200 569 SUPERFAMILY Acetyl-CoA synthetase-like 69 561 - -
Adu09g02200 569 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 18 568 - -
Adu09g02200 569 PANTHER AMP-DEPENDENT SYNTHETASE AND LIGASE FAMILY PROTEIN-RELATED 18 568 - -
Adu09g02200 569 Gene3D - 41 462 IPR042099 -
Adu09g02200 569 Pfam AMP-binding enzyme 69 466 IPR000873 -
Adu09g02200 569 CDD 4CL 45 557 - -
Adu09g02200 569 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g02200 Adu-Chr9 107264484 107266831 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g02200 27 565 Monolignol Biosynthesis Gene Families AT1G20500 43.455 1.07e-151 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g02200 K10526 - gmx:100796728 885.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g02200 09 107264484 107266831 Adu09g02200 09 107264484 107266831 ECH