LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu09g02190	ATGGAGGAGACTGAAGCTTGTGCAAACCACAGCCCGCTCGTTCTGTTAAAGCAAGGTGCTGAAGCTAGGGTTTTTGAGTCCAATTTTGTGGGGAGGAGGTCTGTTATCAAGGAACGCTTCTCAAAGAAGTATAGGCATCCAACTTTGGATATTAAGCTTACCCTTAGGCGCTTAAATGCTGAGGCTAGGTGCATGACCAAAGCGAGAAAGCTTGGGGTTTGTACTCCTGCACTCTATGCCGTGGATACTGTGTTGAACACTTTAACTTTTGAGTATGTTGAGGGCCCTTCCCTCAAAGAAGTACTTCTTGAATTTGGGTTGAAAGGTGTTGTTGAAGAGCGGCTTGATGATATTGCTTCCCAAGTTGGTGATGCAATTGGTAAATTGCATGATGGTGGCCTTATTCATGGTGACTTAACAACATCAAATATGTTGCTGAAGAGTGGTACCAATCAATTGGTCCTAATTGACTTTGGATTGAGCTTCACTTCAACTCTACCAGAAGATAAAGCTGTTGATTTGTATGTTCTGGAAAGAGCTCTTCTTTCAATGCATTCGTCATGTGGGAATGTGATGGATCGAATACTTGCTGCATACCGCAAGTCATCAAAGCAGTGGTCATCCACATTGAATAAACTTGCTCAAGTGCGACAAAGAGGGCGAAAGAGGACCATGGTTGGATGA	684	0.4357	MEETEACANHSPLVLLKQGAEARVFESNFVGRRSVIKERFSKKYRHPTLDIKLTLRRLNAEARCMTKARKLGVCTPALYAVDTVLNTLTFEYVEGPSLKEVLLEFGLKGVVEERLDDIASQVGDAIGKLHDGGLIHGDLTTSNMLLKSGTNQLVLIDFGLSFTSTLPEDKAVDLYVLERALLSMHSSCGNVMDRILAAYRKSSKQWSSTLNKLAQVRQRGRKRTMVG	227

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu09g02190	227	PANTHER	O-SIALOGLYCOPROTEIN ENDOPEPTIDASE	3	227	IPR022495	GO:0004674
	Adu09g02190	227	PANTHER	EKC/KEOPS COMPLEX SUBUNIT BUD32-LIKE ISOFORM X1	3	227	-	-
	Adu09g02190	227	ProSiteProfiles	Protein kinase domain profile.	10	227	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Adu09g02190	227	TIGRFAM	arch_bud32: Kae1-associated kinase Bud32	16	221	IPR022495	GO:0004674
	Adu09g02190	227	SUPERFAMILY	Protein kinase-like (PK-like)	15	175	IPR011009	-
	Adu09g02190	227	ProSitePatterns	Tyrosine protein kinases specific active-site signature.	134	146	IPR008266	GO:0004672\|GO:0006468
	Adu09g02190	227	Pfam	Protein kinase domain	55	162	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Adu09g02190	227	Gene3D	Phosphorylase Kinase; domain 1	21	93	-	-
	Adu09g02190	227	Gene3D	Transferase(Phosphotransferase) domain 1	106	224	-	-
	Adu09g02190	227	CDD	PKc	18	161	-	-
	Adu09g02190	227	SMART	serkin_6	10	226	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu09g02190	Adu-Chr9	106934594	106937751	Dispersed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CMGC_CDKL-Os	Adu09g02190		Pkinase	4e-11	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu09g02190	K08851		-	jre:109018511	394.045