Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g02188 ATGTTTTCAAGGTTGGTACATCCCTGCGGCGGTGGCGGTGATGGCGACGGAGTGGAAGAGATGATGGTGCAGGGCGGAGGAGGAGGAGGAGGAGGAGGAGGTGGAGAGCCGTCTCTGGTTTTGACCTCTGATCCGAAGCCTCGGCTTCGTTGGACCACGGACCTCCATGAACGCTTCGTTGATGCTGTCACTCAACTCGGCGGTGCCACCAAAGCCACACCAAAAGCGATTTTGCGGACAATGAATGTCAAGGGTTTGACTCTATATCACTTAAAGAGTCATCTGCAGAAATACAGGCTTGGTAAGCAATCTGGAAAAGATTTTGATGAGGGATGCAAAGATGCTTCGTACCCTCTGGAAAGCCCCAGTACAAATAACTCATCTCCTAAGGCGTCTTATGATGCAAATGAGGGCCAAGAAGTAAAGGAAGCATTAAGGGCACAAATGGAAGTGCAAAGTAAACTACATTTGTTAGTGGAGGTAATGTTGCAGGCAGAGAAGCACTTGCTAATTTGCCAGGATGCTGAACAGACATATATGGTCATGCTTGAGAGAGCTTGCAAGATGCTGGCTGATCAAATTATTAGCAATCCAATGGTCGACACAGGCAGCCAAAGGTTGGAAGGATTGCATGTTTCGGAAGTGCTGGTGCCTTCGCTTATTCTGCTGCCCCAGGGAACTGAAAGCTGCCTAACATCACTTGAGAATCTCGGCGGATTGACGCTGGAGGGATCTCCAAGCGGGGCAAGGAAGAGAATTCTGAATTTAGACTCAGTGGTAGCTCCTTTGATGTGGAACGAAGCTAACATGAGAACTCAGGGTATCCATTCAAGTCAAGTGAATCCTCATCACGAAATAACTGGGTATGGTATGTAG 876 0.484 MFSRLVHPCGGGGDGDGVEEMMVQGGGGGGGGGGGEPSLVLTSDPKPRLRWTTDLHERFVDAVTQLGGATKATPKAILRTMNVKGLTLYHLKSHLQKYRLGKQSGKDFDEGCKDASYPLESPSTNNSSPKASYDANEGQEVKEALRAQMEVQSKLHLLVEVMLQAEKHLLICQDAEQTYMVMLERACKMLADQIISNPMVDTGSQRLEGLHVSEVLVPSLILLPQGTESCLTSLENLGGLTLEGSPSGARKRILNLDSVVAPLMWNEANMRTQGIHSSQVNPHHEITGYGM 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g02188 291 Gene3D - 45 103 - -
Adu09g02188 291 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 46 101 IPR006447 GO:0003677
Adu09g02188 291 SUPERFAMILY Homeodomain-like 46 102 IPR009057 -
Adu09g02188 291 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 208 290 IPR044848 GO:0003700
Adu09g02188 291 Pfam MYB-CC type transfactor, LHEQLE motif 140 189 IPR025756 -
Adu09g02188 291 MobiDBLite consensus disorder prediction 111 137 - -
Adu09g02188 291 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 43 103 IPR017930 -
Adu09g02188 291 MobiDBLite consensus disorder prediction 1 36 - -
Adu09g02188 291 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 2 211 - -
Adu09g02188 291 MobiDBLite consensus disorder prediction 118 134 - -
Adu09g02188 291 Pfam Myb-like DNA-binding domain 49 99 IPR001005 -
Adu09g02188 291 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 208 290 - -
Adu09g02188 291 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 2 211 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g02188 Adu-Chr9 106898110 106899975 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g02188 35 212 G2-like Transcription Factor Family AT3G24120 54.098 3.69e-56 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Adu09g02188 Myb_DNA-binding 1.1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g02188 - - aip:107619379 545.043