Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g02159 ATGAACAACACTTCCAATTCTACTGAGGACTCTCAAGAGGACATAACCGGATACACGTATTATTCGGTTTCTTTGTCTCTTGGCTTCCTCCTCTTGATGGCATTCATAGCTCTCACTGCATACTACTGCAGCAAAAGCAGGATTCGAGACGAGCGAACCGGACCAAGCTCCGGAAGAACCAATAGCAGTTTCAATTCAAACAGGACAGTGATCATGGACAGAGACCCATCCTCTATAACAATCCAAATTGGTGAGGAGCAACAACAAATGCAAGAATCAATCCTCAAAAGTTATCCTATGTTGTTGTTCTCCCAAGCCAAGCTTCATCAAAAGGCAGATGATCCAACAGAACTTCTTAGTTGCTCAATATGTTTGGCAGATTATGCAGACTCAGAGTGGTTACGGCTATTACCTGATTGTGGCCATTTTTTTCATAGGGATTGTATTGATGTATGGTTGAGGCTAAACCTTTCTTGTCCAATGTGTAGGAACTCTCCATTACCCACCCCTCTTGCTGAAGTTGCTGCCTTGGCCGCTACAAGGGCTTATTGA 552 0.4366 MNNTSNSTEDSQEDITGYTYYSVSLSLGFLLLMAFIALTAYYCSKSRIRDERTGPSSGRTNSSFNSNRTVIMDRDPSSITIQIGEEQQQMQESILKSYPMLLFSQAKLHQKADDPTELLSCSICLADYADSEWLRLLPDCGHFFHRDCIDVWLRLNLSCPMCRNSPLPTPLAEVAALAATRAY 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g02159 183 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 78 167 IPR013083 -
Adu09g02159 183 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 1 176 - -
Adu09g02159 183 SMART ring_2 121 162 IPR001841 -
Adu09g02159 183 Pfam Ring finger domain 120 163 IPR001841 -
Adu09g02159 183 SUPERFAMILY RING/U-box 95 166 - -
Adu09g02159 183 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 176 IPR045899 -
Adu09g02159 183 CDD RING-H2_PA-TM-RING 121 163 - -
Adu09g02159 183 ProSiteProfiles Zinc finger RING-type profile. 121 163 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g02159 Adu-Chr9 106371221 106371772 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g02159 11 178 C3H Transcription Factor Family AT5G06490 34.270 1.89e-31 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g02159 - - adu:107466513 326.635