Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g02158 ATGTCCGATTCCACTTCCAACTCCGACTCCGATAACGAAAACTTTGTTTTAACGATGATAATTAATAACTCCAACGACAGTGCTTTTCGTTTCACTCATGCCATGGCATTCATATTTGGCTTGATATTCTTGTTTAAGACCATAAATTTCTTACATTCTTGCTTTTTCAGGCCTCCAAGAACTCCCACCATACTCCACACACCGGTCGATGTTCCATCACCTTACGTGTCCGTGTCAGTGGCTGAGTCCTTAGAGCACGGTCACTGCCACGGCCACGTAGACGGTCACATCGACACGGGTTACGAGAATTCCCCTAAGATGTCATATTCTGATGAAGTAATGAAGAAAAGTAGTGTTGGAGGTGGATGCATCATATGCTTAGGGGATTACAAAGAGATTGAGATGTTGAGGGTTCTTCCTGGTTGTGGCCATGTCTTTCACCAAGCTTGTGTTGATCCATGGCTCATGTTACACTCCACATGCCCCATATGCCGAAAATCATTGCCACATGCACCATAG 519 0.447 MSDSTSNSDSDNENFVLTMIINNSNDSAFRFTHAMAFIFGLIFLFKTINFLHSCFFRPPRTPTILHTPVDVPSPYVSVSVAESLEHGHCHGHVDGHIDTGYENSPKMSYSDEVMKKSSVGGGCIICLGDYKEIEMLRVLPGCGHVFHQACVDPWLMLHSTCPICRKSLPHAP 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g02158 172 Pfam Ring finger domain 123 165 IPR001841 -
Adu09g02158 172 SUPERFAMILY RING/U-box 115 169 - -
Adu09g02158 172 SMART ring_2 123 164 IPR001841 -
Adu09g02158 172 ProSiteProfiles Zinc finger RING-type profile. 123 165 IPR001841 -
Adu09g02158 172 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 88 171 IPR013083 -
Adu09g02158 172 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 23 168 IPR045899 -
Adu09g02158 172 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 23 168 - -
Adu09g02158 172 CDD RING-H2_PA-TM-RING 123 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g02158 Adu-Chr9 106364113 106365005 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g02158 93 167 C3H Transcription Factor Family AT5G06490 52.000 4.61e-21 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g02158 - - adu:107466495 349.747