Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g02157 ATGTCCAATAATTCCACTTCTCAATCAAAAGATGGTTTTGATGCTAGTGGTTTCACATATGGCGTAGCATTCATACTAGTAGCCGGTGTTCCTCCATCGTCACAATCTCATCAAACATTGGAACACCACGTGGATATTCGTATCGACACGAGTTATGAGAATTACCCTAAGATGCCATATTCCGATGAGGTAAAGAACAAAAATAGTGTTGTGGGTGGATGCACCATATGCTTAGGAGACTATAAAGAGAGTGAGATGTTGAGGGTTCTTCCTGGTTGTGGCCATGCCTTTCACCAACCTTGTGTTGATCCATGGCTCATGTTGCACTCCACATGTCCCATATGCCGAAAATCATTGCCTACTCAAGCTCCATAG 375 0.432 MSNNSTSQSKDGFDASGFTYGVAFILVAGVPPSSQSHQTLEHHVDIRIDTSYENYPKMPYSDEVKNKNSVVGGCTICLGDYKESEMLRVLPGCGHAFHQPCVDPWLMLHSTCPICRKSLPTQAP 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g02157 124 ProSiteProfiles Zinc finger RING-type profile. 74 116 IPR001841 -
Adu09g02157 124 CDD RING-H2_PA-TM-RING 74 116 - -
Adu09g02157 124 Pfam Ring finger domain 74 116 IPR001841 -
Adu09g02157 124 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 33 122 IPR013083 -
Adu09g02157 124 SMART ring_2 74 115 IPR001841 -
Adu09g02157 124 SUPERFAMILY RING/U-box 54 122 - -
Adu09g02157 124 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 34 119 IPR045899 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g02157 Adu-Chr9 106351581 106352036 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g02157 53 123 C3H Transcription Factor Family AT5G06490 49.351 2.27e-22 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g02157 - - adu:107466507 261.151