Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g02156 ATGAAGCATGATGAAGAATCATTAGGAAAAGTAATGTTTTTGTTATTATTCATTTTCTGCCTAATATTCATATCCTTTGTTGTTACATTTGCTTCTTATTTATGCACTATTTGTACCTTTTCTTCATCTAACAATAACAACAACAATGATCAAAATGGTGATGGCATTCAAGATGGCACAGGCTCTAATATTAATCACATGGCAATTACTGTAGAATCTCAACCTCATGAGATAGGATTATTGGATGAGAATAATAACAACGATAACGATAACAATAATAATAGTGGTACATCATGGTACAACAGGTATCCTAGTATTCAATACTCAAATAAGAGCAAAGTGATTATTGGTGGAGCTACTACTTGCAGCATAGGTAGCTCAAGTTCTTGCGCCATATGCTTAGCGGATTATAATGAATCTGATTGGATAAGAGTGTTGCCTGCATGCGATCACTTTTTTCATCTCAAGTGTGTCGATCCTTGGTTGAGAATCAATATGTCGTGTCCTATTTGTAGGAAAAAACTTCTTCATATTCATTCCACAATTCAAGTCTAA 555 0.3387 MKHDEESLGKVMFLLLFIFCLIFISFVVTFASYLCTICTFSSSNNNNNNDQNGDGIQDGTGSNINHMAITVESQPHEIGLLDENNNNDNDNNNNSGTSWYNRYPSIQYSNKSKVIIGGATTCSIGSSSSCAICLADYNESDWIRVLPACDHFFHLKCVDPWLRINMSCPICRKKLLHIHSTIQV 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g02156 184 CDD RING-H2_PA-TM-RING 130 172 - -
Adu09g02156 184 ProSiteProfiles Zinc finger RING-type profile. 130 172 IPR001841 -
Adu09g02156 184 Pfam Ring finger domain 129 172 IPR001841 -
Adu09g02156 184 SUPERFAMILY RING/U-box 129 178 - -
Adu09g02156 184 SMART ring_2 130 171 IPR001841 -
Adu09g02156 184 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 81 177 IPR013083 -
Adu09g02156 184 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 3 177 IPR045899 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g02156 Adu-Chr9 106338435 106338989 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g02156 126 176 C3H Transcription Factor Family AT5G06490 58.824 1.03e-17 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g02156 - - mtr:MTR_1g090440 97.8265