Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g02118 ATGGAATCAAAGTTTTTGGACAACGACAATGCAACCATAAGAAGTTCTCATCACTCTCTTACTGCTTCTCATCATGTTCATGCAAACTATTCAATGGAATCACCTGAAAGGCTTCTTTTATGTTCACATTCAATGAAAGAAGAGTTACCACCCTATGATGCCACTTTGATTGGCCATGTCCCTTCAAGTTTCCATGGCAATGAAGACACAAGAAATGGGCAAGAGAAAAACCATACCTTTCAAAAATTCAATAACAACCCTCTGAATCTATTGGAGACTCTGCCAGCATTAACCATAGCACCCTCTTCTTCTGATGCCTCACCACCTTCTTTGATTTCTCCTCCTTCGTCACACAAATTTCCAAACTTGACCTTGTTCTTGCAGGAAACTTCCATGCTCTACTCATCATCCTCGCATCTAAAAAGTGGTGAATCCATGTCATCAAAATCTTCAAACTCCACATTTCCATTGTCGCCACTCCGCCAAACTCAGTGCCAAACAACCACCGCCGATCCACACAAAATCACCAAGAATCTATCAAACATGAGGAGATCCAAGTCTTTCAGTGACCACCACAATTGGTTGAGCACAAGGACACAACCTCTTAAGTGCAGCGGCGGAGGTGGAAGAGTCAACAACAACAACAAGCTTTTCAAAGGGGTGAGACAAAGACACTGGGGAAAATGGGTTGCTGAGATAAGATTACCAAGAAACAGGACAAGGGTATGGTTAGGAACATTTGATACAGCTGAAGATGCAGCCATTGCATATGATACTGCAGCATATATACTAAGAGGAGATTATGCACAGTTGAATTTCCCTGAATTGAAGCATGTGATCAAGGCCAATTCTCTGAATGGAACCATTTCAGCACTCGTTGAGGCAAAACTACAAACAGTTCATCTGCATAAGAAGAATCCCAATAACAATAACAATAACAATAGCAGCAACAACAATTATGATGATTCACCACCATCAGCAGTTTCAGCATGCAAAAATAATGGCAATAAGGGTTCATCATCAAGCATAATGGAGTTGCAGTTAGAGGAAAATGAGAGAAGCAAAAGTGGCTCACTTTCTCATCATCAAGTTTTGGATGTGGAAGGTGTTCAATTGAGCAGAATGCCATCATTGGATATGGACCTTATTTGGGATGCACTTTTAGTCTCTGATTCATGA 1179 0.4097 MESKFLDNDNATIRSSHHSLTASHHVHANYSMESPERLLLCSHSMKEELPPYDATLIGHVPSSFHGNEDTRNGQEKNHTFQKFNNNPLNLLETLPALTIAPSSSDASPPSLISPPSSHKFPNLTLFLQETSMLYSSSSHLKSGESMSSKSSNSTFPLSPLRQTQCQTTTADPHKITKNLSNMRRSKSFSDHHNWLSTRTQPLKCSGGGGRVNNNNKLFKGVRQRHWGKWVAEIRLPRNRTRVWLGTFDTAEDAAIAYDTAAYILRGDYAQLNFPELKHVIKANSLNGTISALVEAKLQTVHLHKKNPNNNNNNNSSNNNYDDSPPSAVSACKNNGNKGSSSSIMELQLEENERSKSGSLSHHQVLDVEGVQLSRMPSLDMDLIWDALLVSDS 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g02118 392 PRINTS Ethylene responsive element binding protein signature 218 229 IPR001471 GO:0003700|GO:0006355
Adu09g02118 392 PRINTS Ethylene responsive element binding protein signature 240 256 IPR001471 GO:0003700|GO:0006355
Adu09g02118 392 SMART rav1_2 217 280 IPR001471 GO:0003700|GO:0006355
Adu09g02118 392 CDD AP2 216 276 IPR001471 GO:0003700|GO:0006355
Adu09g02118 392 SUPERFAMILY DNA-binding domain 217 274 IPR016177 GO:0003677
Adu09g02118 392 Pfam AP2 domain 218 265 IPR001471 GO:0003700|GO:0006355
Adu09g02118 392 Gene3D AP2/ERF domain 217 275 IPR036955 GO:0003700|GO:0006355
Adu09g02118 392 MobiDBLite consensus disorder prediction 138 170 - -
Adu09g02118 392 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF062 3 391 - -
Adu09g02118 392 MobiDBLite consensus disorder prediction 303 342 - -
Adu09g02118 392 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 3 391 - -
Adu09g02118 392 ProSiteProfiles AP2/ERF domain profile. 217 274 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g02118 Adu-Chr9 105704131 105705331 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g02118 119 387 AP2-EREBP Transcription Factor Family AT4G13620 44.280 3.54e-58 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Adu09g02118 AP2 2.9e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g02118 - - aip:107616692 620.157