Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g02092 atggaaagcatagcttgCTTCATCACCAGCGAGGCATGTGAGAAGTGCCAGAAAGAGAAGAGGAAGACCATTAATGGAGATGATTTGTTATGGGCGATGGCCACTTTAGGATTTGAAGACTACATAGAACCTCTTAAAGTGTACCTAGCAAGATTCAGAGAGTTGGAGGGTGACACCAAAGGATCTGCTAGAACTAGCGATGGATCTGTTAGACGAGATCAAGTTGGTCTAGCGGGTCAAAATACTCAGCTTGTTCATCAGGGTTCACTGAATTATATTAGTTCCCAGGTGCAGCAACAACATTTGGTTATTCCTTCAATGCAAAGCCATGAATAG 336 0.4107 MESIACFITSEACEKCQKEKRKTINGDDLLWAMATLGFEDYIEPLKVYLARFRELEGDTKGSARTSDGSVRRDQVGLAGQNTQLVHQGSLNYISSQVQQQHLVIPSMQSHE 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g02092 111 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 2 33 IPR003958 -
Adu09g02092 111 Gene3D Histone, subunit A 2 100 IPR009072 GO:0046982
Adu09g02092 111 PRINTS CCAAT-binding transcription factor subunit A signature 35 53 - -
Adu09g02092 111 PRINTS CCAAT-binding transcription factor subunit A signature 16 34 - -
Adu09g02092 111 SUPERFAMILY Histone-fold 5 94 IPR009072 GO:0046982
Adu09g02092 111 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 5 91 IPR027113 GO:0001228|GO:0006355|GO:0016602
Adu09g02092 111 PANTHER BNAA04G21250D PROTEIN 5 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g02092 Adu-Chr9 105069704 105075146 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g02092 7 105 CCAAT-HAP3 Transcription Factor Family AT2G37060 66.000 2.70e-43 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Adu09g02092 CBFD_NFYB_HMF 2.9e-08 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g02092 K08065 - gmx:100815883 188.348