Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g02045 ATGTTGCAGGATGTGTTTGATCAGCCACTGCCACCAAAGGTTGAGCAACAACTCCCCATTGATGAAATTTCAAGCCCAATCAGTGCTAGACTTTTTGAGCTATGTGACTCTGATTTGTTCCCAGAAGCACTTCAAAACTCTGAGGTTACTTCAAGCTCAAATTGTTGCTATGAAGAGAACTCCTCATATGCAACAAACATGTCTCTAGCATTAGAAGTAGAAACCAAGTTCAATAACAATAACAATAACAATAATACAAATAGCAATAATAGCAATAACAGTGTCACCACCCCAAGTAGCACCACCACCACCAACAACAACACAACCAACAGTAGTAACCTGTCAATCATCTTTGACTCTCAAGAAGAGCTTGACAATGACATCTCTGCCTCCATAGATTTCTCATCTTCACCTGCAGCTTTCAATGTTCCACCGATTGCTGTTGCACCTCCTCCTCCTCCTCTCATGGGGGCTCCTCAATTGCCTTCTGTCTTTGAAGAGGATTGCATTTCTTCTGCTGTTCCTTCTTATGTCACTCTCAACCCTTCTTCTCCTTCTTGCTCTTATCTCAACCCTGCTGCCATTCCACCACCTTACATGCCTCCTGCTGGTCCCCTGGCCACCGCCTTGTCGGCCGACCGTGCCGCTTTGTTCACCGGAAGCATGCTTCTTGGCTCTGAGCTTCAGAGACCAGACCTTGAATACCAAGGTGAAAATGGTGGAATTTATTGTACAGATTCAATTCACAGAGTGTTTAACCCTCAAGAGCTTCAGGCACTTAGTACTGAGAGTCAGCAACTAGTGGCTGGAGGTGGGAGTTCTGCCAACTTAACACCAGAAATCTCAAACTTGGAGGACTCTAGCTTCAAGGTTGGGAAACTCTCTGTTGAGCAAAGAAAAGAAAAGATTCATAGATACATGAAGAAAAGAAATGAAAGAAACTTCAGCAAGAAAATCAAGTATGCCTGCCGCAAAACTCTGGCAGATAGCCGGCCGCGAGTTCGAGGAAGGTTTGCAAAGAATGATGACTTTGGAGATGCTCAGAGACCTGCAAGTAGCAATCATGAAGAAGAAGATGAAGAAGAAGTAGTTGTGAAAGAAGAAGATGATATGGTTGATTCCTCAGATATCTTTGCTCATATCAGTGGAGTGAACTCCTTCAAATGCAACTATTCCATCCAGTCCTGGATTTGA 1194 0.438 MLQDVFDQPLPPKVEQQLPIDEISSPISARLFELCDSDLFPEALQNSEVTSSSNCCYEENSSYATNMSLALEVETKFNNNNNNNNTNSNNSNNSVTTPSSTTTTNNNTTNSSNLSIIFDSQEELDNDISASIDFSSSPAAFNVPPIAVAPPPPPLMGAPQLPSVFEEDCISSAVPSYVTLNPSSPSCSYLNPAAIPPPYMPPAGPLATALSADRAALFTGSMLLGSELQRPDLEYQGENGGIYCTDSIHRVFNPQELQALSTESQQLVAGGGSSANLTPEISNLEDSSFKVGKLSVEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDDFGDAQRPASSNHEEEDEEEVVVKEEDDMVDSSDIFAHISGVNSFKCNYSIQSWI 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g02045 397 PANTHER CCT MOTIF FAMILY PROTEIN 153 397 - -
Adu09g02045 397 PANTHER CCT MOTIF FAMILY PROTEIN 20 146 - -
Adu09g02045 397 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 20 146 - -
Adu09g02045 397 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 153 397 - -
Adu09g02045 397 MobiDBLite consensus disorder prediction 77 112 - -
Adu09g02045 397 MobiDBLite consensus disorder prediction 334 356 - -
Adu09g02045 397 MobiDBLite consensus disorder prediction 334 366 - -
Adu09g02045 397 Pfam CCT motif 299 341 IPR010402 GO:0005515
Adu09g02045 397 ProSiteProfiles CCT domain profile. 299 341 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g02045 Adu-Chr9 103554754 103559298 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g02045 271 343 C2C2-CO-like Transcription Factor Family AT5G24930 38.462 5.62e-11 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Adu09g02045 CCT 5.1e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g02045 - - gmx:100803778 480.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g02045 09 103554754 103559298 Adu09g02045 09 103554754 103559298 ECH