Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g02001 ATGAATGAGCAATACCAGGAGGACGATGACTTTAACCAAAAAGAAGAGCTATCAGAAGATATCCTTGAAGCCGCTTATGCGGTTGACTTCGTGCAAGACATTACAACTTTGAAATTTAGTGATAATTTTGCGGAGAAAATTGGCAAATACCACTTTTCTACTTTGCAGCTTGCATTTGATTTTTATATGAAGTACTCAAAGTTGAAGGGCTTTAATGCAAGGAAGAGCAAGACCTTCAAGAATAGTACTGGCGAGATTTACAAACAAAAGTTTGTATGTCATAGGCAAGGATTCAGGATGGAGAAATATTACACGATGGAAAAAAGGAAGAAGAAGCCTAAATTGGAAACAAGAACTGCATGTGAAGCTCGAATGGATGTTAAATTTGTACCTAAAAGTGGAAGGTGGCATATCTTTTATTTCTCCAACAAACACAACCATGATCTATTGGATACACAATTCAGTGCTATGTTGCCTGCCCACAGAAAAATGACAGAGGCAGATATTATGTAA 513 0.3704 MNEQYQEDDDFNQKEELSEDILEAAYAVDFVQDITTLKFSDNFAEKIGKYHFSTLQLAFDFYMKYSKLKGFNARKSKTFKNSTGEIYKQKFVCHRQGFRMEKYYTMEKRKKKPKLETRTACEARMDVKFVPKSGRWHIFYFSNKHNHDLLDTQFSAMLPAHRKMTEADIM 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g02001 170 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 7 163 - -
Adu09g02001 170 Pfam FAR1 DNA-binding domain 60 150 IPR004330 -
Adu09g02001 170 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 7 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g02001 Adu-Chr9 101155123 101155731 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu09g02001 FAR1 5.4e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g02001 - - ahf:112803508 311.612