Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g01999 ATGTCTGATAGTGAGTCAGATTTGGATGATGGCAGCACATCAGGGTTGTCAGGTCATTGGACTGATGGTTGGAGCACCGATTCGGGAGATGGGGATGACTTGAACGGGTTGGAGGAACCGCTGACTGAGGAAGGGGATATTGGCCATTCCGACAGTGAATACGACGGCAGGGATGGTGGTGGAAGCTATATGCATGCTGCTGTAGAGGATCATGCAAACTTCGAGAATGTCATGGGTATACAATTCAGCTATCCAGACCCTGTGATTGCTTCCGTGTTGTTATCTGTAGAATTTAATGGGATTGGAGATGCGTATGCAAGCTATGTCGCGTATGCAAAGGGTATTGGCTTTGCAGTGCGAAAGGGAGATTCTATTAAAGACGAGGAGGGGAATATTGTTAGAAAGTTTTTCTACTGCAATCGGCAAGGGCTGCGTGAAAAGAAGCATTACGAGCGAGTTGATAGAAAAAGGACTCATAAACCGGAGATGAGAACGAATTGCAATGCCAAGCTTGTGGTGTTTCTAGACAAAAGTTGTAGGAAATGGCGAACGAAAACATTGGTCGAGGAACATAATCACGAATTGGCGCCCCAAGAGTTCACTAATGTCATGGCTCCACATAGGAAGATCCCAGAAGGGCACAAAGCGCATATACATAGCATGCATGAAGATGGGTTCAAAACAACTCAAATAATGGGCTTCTTTGCCCACATGTGTggtggatatcagaatcttaacttcattaATTACAAGACTCTTTACTCAAATCCGGTGTTGACAACGGGTCTTGAAGCATTGGAAAGATCTGTGAGCAAGTTCTACACGAGGAAAATATTTTATGAGGTGCAAAAACAGATTGAGGGAGTTGGGGCATTGTTAGTGTTGCACAGGGACAGTATTGGTGGCACGGAGAAGTTCATGTTCCGAAAGTATCGAAAGTCTCATCATGTATACTCGGTTTTCGTGGATAGAAGTTGTGATAAGTATGAATGTTCTTGTAAGTTGTGGGAGAGATTAGGGATACCTTGCTGCCATATATTTTGTGTCCTGAAAGAGCTAGAGAAAGAAGAATTGCCGAGCCGATTGGTCCTGCGCAGGTGGTGCAAAGATGCCAAGGTCGCTGATAGTAGTAGTCAGCATGCCTCAGTCAATCCCACAGATGGATTTCGCGTTAGATACGGTGCATTGTGGAGTGCCTGCCTGTCACTGTGTTTTACAGCCGCGCAATGCACGAAAACATACAACACTGCCATGACAGAGGTGGCCAGAATGTCGAGGGAGTTTGAATCTCTAGGTGGCATAGGACAAATGAGCAGTCGTGTTCAAGTAGGGGCGGATGAAACTCATATTCTCGACCCAAAGCGCAATCAGCGCGGGCGACGATCTGGCTCAAGCATTCGTGCTAATCTATGGTCATTCAACCAGAACGATGTCCTTCGCCAGTTGACCCTCGCCGACCGCCACGACCACGGAGTCGAATTCGTTCCAGATCGTGATTGGAGCCATGTGGCTCTTTACAAGAGCCGCCAAACCTCACTCCGGCAAGTGTGTACTAGTCTGCACGAACCTCCGCCTGTGTACCACAAGCAGACCTACGAATCCACCACCAAGGGAACTGTTTACAGATTCCTGGTTGTCGTTCCAACCGACTCGGAGTATTCCTCTTGCAGTGCGGCCGGTAGATACTCGACGGACGAACATCTTGCGCACGCAGCGGCCTTGATGAGAAAGCTGTTGCAGTTGCATTCGATGGTCGTTGATGACTTCAACCACGACTTGTTAGAGGAGGAGAAACTTGTCCACTATGAGACCCGCAACGCGCTTGAACGACTTCGTGCACGTTATCGCAACATGGCTTCATCATTCAGGAATTATCGCCGCCTGAATCACCCTGAGTACATGTCATCAAGTTCCGAAGAAGAGCAAAACAGAGAGATTCATAGAGGAGAGAGACCTCGCCTCGCCGTCGTCGTTGCCCTCGCCACCGCTGTTCATCGCCTCTCCAGATCTAGTCGCAACGTCCAAGTCTCTGAGAATGTTCCATTACGAAGTGGGGGTGTAGGTGGAGGCCACTATCGGAATTCTTTGCAGCCATTTTTCAGTACTTGA 2109 0.4765 MSDSESDLDDGSTSGLSGHWTDGWSTDSGDGDDLNGLEEPLTEEGDIGHSDSEYDGRDGGGSYMHAAVEDHANFENVMGIQFSYPDPVIASVLLSVEFNGIGDAYASYVAYAKGIGFAVRKGDSIKDEEGNIVRKFFYCNRQGLREKKHYERVDRKRTHKPEMRTNCNAKLVVFLDKSCRKWRTKTLVEEHNHELAPQEFTNVMAPHRKIPEGHKAHIHSMHEDGFKTTQIMGFFAHMCGGYQNLNFINYKTLYSNPVLTTGLEALERSVSKFYTRKIFYEVQKQIEGVGALLVLHRDSIGGTEKFMFRKYRKSHHVYSVFVDRSCDKYECSCKLWERLGIPCCHIFCVLKELEKEELPSRLVLRRWCKDAKVADSSSQHASVNPTDGFRVRYGALWSACLSLCFTAAQCTKTYNTAMTEVARMSREFESLGGIGQMSSRVQVGADETHILDPKRNQRGRRSGSSIRANLWSFNQNDVLRQLTLADRHDHGVEFVPDRDWSHVALYKSRQTSLRQVCTSLHEPPPVYHKQTYESTTKGTVYRFLVVVPTDSEYSSCSAAGRYSTDEHLAHAAALMRKLLQLHSMVVDDFNHDLLEEEKLVHYETRNALERLRARYRNMASSFRNYRRLNHPEYMSSSSEEEQNREIHRGERPRLAVVVALATAVHRLSRSSRNVQVSENVPLRSGGVGGGHYRNSLQPFFST 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g01999 702 MobiDBLite consensus disorder prediction 1 62 - -
Adu09g01999 702 MobiDBLite consensus disorder prediction 42 58 - -
Adu09g01999 702 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 96 215 IPR031052 GO:0006355
Adu09g01999 702 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 249 443 IPR031052 GO:0006355
Adu09g01999 702 ProSiteProfiles Zinc finger SWIM-type profile. 318 354 IPR007527 GO:0008270
Adu09g01999 702 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 96 215 - -
Adu09g01999 702 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 249 443 - -
Adu09g01999 702 SMART 26again6 329 356 IPR006564 GO:0008270
Adu09g01999 702 MobiDBLite consensus disorder prediction 7 24 - -
Adu09g01999 702 Pfam FAR1 DNA-binding domain 108 196 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g01999 Adu-Chr9 101138815 101144824 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu09g01999 FAR1 9.7e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g01999 - - aip:107610720 454.907