Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g01994 ATGAAAACCAGGAGTGTTTTGAGTGACGAGAAGGGTAAGGGAAAGCAAAATGTGATGGCTTTGGTGGACAATCTCAGGCCATACGTGAAAAGAGGCCTTCTATTAAAATATGAAGAGAAAATGGTCATTGACCTCCATGCTCAATTAAGAAATAGGTGGTCTATGATTACGTCACATTTGCCTGGAAGAACTGATAATGAGATCAAGAATCATTGGAACACCCACATCAAGAAAAAGCTCAAGAAATTGAGAATTGATCCTGTCACATACAAGCCATTCTCTAATAACACCACTGACTAA 300 0.39 MKTRSVLSDEKGKGKQNVMALVDNLRPYVKRGLLLKYEEKMVIDLHAQLRNRWSMITSHLPGRTDNEIKNHWNTHIKKKLKKLRIDPVTYKPFSNNTTD 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g01994 99 SMART sant 30 78 IPR001005 -
Adu09g01994 99 Gene3D - 36 96 - -
Adu09g01994 99 CDD SANT 38 76 IPR001005 -
Adu09g01994 99 PANTHER MYB TRANSCRIPTION FACTOR 15 97 - -
Adu09g01994 99 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 15 97 - -
Adu09g01994 99 SUPERFAMILY Homeodomain-like 21 85 IPR009057 -
Adu09g01994 99 Pfam Myb-like DNA-binding domain 38 75 IPR001005 -
Adu09g01994 99 ProSiteProfiles Myb-like domain profile. 26 76 IPR001005 -
Adu09g01994 99 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 26 80 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g01994 Adu-Chr9 100726454 100727509 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g01994 14 94 MYB Transcription Factor Family AT1G66230 71.605 5.49e-36 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Adu09g01994 Myb_DNA-binding 3.7e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g01994 K09422 - gmx:100794413 132.109