Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g01987 ATGGATTCCTTGCTCCCACATTTTTGTAGGAAGGTTTCTGCGGCCCTAAATCGCTCAACTGGTTCATCAGGAACACGTGACCATGATTTACCAGATGATAAATCCAAATGGGAATGCGTGAGGAAAGGGGTTTGCTACATTTGCTGCGAAAGCAATATTGATTCTCTCTTGTACAGATGTGGGCACATGTGCACATGTTCTAACTGTGCTAATGATTTGCACCGAATTGGAAGGAAGTGTCCAATGTGTCAAGCACCAGTTGTTGAAGTAATTCGTGCTTATTCCATACTATAG 294 0.4286 MDSLLPHFCRKVSAALNRSTGSSGTRDHDLPDDKSKWECVRKGVCYICCESNIDSLLYRCGHMCTCSNCANDLHRIGRKCPMCQAPVVEVIRAYSIL 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g01987 97 PANTHER PROTEIN, PUTATIVE-RELATED 10 96 - -
Adu09g01987 97 ProSiteProfiles Zinc finger RING-type profile. 45 84 IPR001841 -
Adu09g01987 97 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 10 96 - -
Adu09g01987 97 SUPERFAMILY RING/U-box 44 90 - -
Adu09g01987 97 Pfam Zinc finger, C3HC4 type (RING finger) 43 89 - -
Adu09g01987 97 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 21 95 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g01987 Adu-Chr9 100264449 100265274 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g01987 45 91 C3H Transcription Factor Family AT3G06140 38.298 9.59e-09 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g01987 - - adu:110275746 190.274