Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g01971 ATGAATGAAGATGGATCAAAGGGTAGGACAAAGGATGACGGCGGAGATGTCCGATATAGAGGCGTACGCCGCCGTCCTTGGGGGAAGTTTGCGGCCGAGATTCGTGACTCCACTAGGCAGGGTCAGAGGGTTTGGCTTGGGACATTCAACACGGCTGAGGAAGCAGCTAGGGCTTATGATAGAGCCGCTTATGCCATGAGAGGTGCATTTGCTATCCTTAACTTCCCAAATGAGTATCCTATGTCCGGTTATGGTAATAACCGCACCGGTGGTGGTGGCAGTGGCTCCTCTTATTCCTCCGGCGCTTCAACGTCCTCTGCTTCATGGCAGGGCAATGTGGAAGGCAGGGAAAGGAGTGAAGTGTTTGAGTTTGAGTACTTGGATGACAAATTGTTGGAGGAGCTTCTTGCATGCGAAGAAAAGAAGAAAAATGGACCATGA 441 0.5079 MNEDGSKGRTKDDGGDVRYRGVRRRPWGKFAAEIRDSTRQGQRVWLGTFNTAEEAARAYDRAAYAMRGAFAILNFPNEYPMSGYGNNRTGGGGSGSSYSSGASTSSASWQGNVEGRERSEVFEFEYLDDKLLEELLACEEKKKNGP 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g01971 146 MobiDBLite consensus disorder prediction 82 114 - -
Adu09g01971 146 PRINTS Ethylene responsive element binding protein signature 19 30 IPR001471 GO:0003700|GO:0006355
Adu09g01971 146 PRINTS Ethylene responsive element binding protein signature 42 58 IPR001471 GO:0003700|GO:0006355
Adu09g01971 146 ProSiteProfiles AP2/ERF domain profile. 18 76 IPR001471 GO:0003700|GO:0006355
Adu09g01971 146 SMART rav1_2 18 82 IPR001471 GO:0003700|GO:0006355
Adu09g01971 146 MobiDBLite consensus disorder prediction 82 113 - -
Adu09g01971 146 PANTHER BNAA01G23960D PROTEIN 7 140 - -
Adu09g01971 146 MobiDBLite consensus disorder prediction 1 20 - -
Adu09g01971 146 PANTHER DNA-BINDING DOMAIN 7 140 IPR044808 GO:0003700|GO:0009873
Adu09g01971 146 CDD AP2 18 77 IPR001471 GO:0003700|GO:0006355
Adu09g01971 146 Pfam AP2 domain 18 68 IPR001471 GO:0003700|GO:0006355
Adu09g01971 146 SUPERFAMILY DNA-binding domain 18 77 IPR016177 GO:0003677
Adu09g01971 146 Gene3D AP2/ERF domain 17 77 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g01971 Adu-Chr9 99695041 99695481 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g01971 13 143 AP2-EREBP Transcription Factor Family AT3G23230 59.848 1.81e-43 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Adu09g01971 AP2 5.7e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g01971 - - adu:107466315 203.756
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g01971 09 99695041 99695481 Adu09g01971 09 99695041 99695481 ECH