Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g01961 ATGGAACGTGGGGTTGTGGATGGCATTATCAACAGGCTTCTAGAAGTAAGAGGCAAACCGGGGAAGCAAGTGCAGCTCTCTGAGGCTGAGATCAGGCAGCTATGCCTTGTCTCCAAGGACATCTTCTTGAGACAACCTAACCTTTTGGAACTTGATGCACCAATCAAGATCTGTGGGGATATCCATGGTCAATATTATGATCTTCTGAGAATCTTTGAAAATGGTGGATTCCCACCTCGTTCCAATTACTTGTTCTTAGGAGACTACGTTGATCGCGGAAACCAAAGTCTTGAGACAATATCTCTTCTTCTAGCATACAAAATCAAATACCCTCAGAACATTTTCCTCCTCAGGGGAAACCATGAATGCGCTTCCATAAACCGTATCTACGGTTTCTACGACGAATGCAAGAGAAGATACAGTGTGAAGCTGTGGAAAACATTCACGGATTGCTTCAACTGCTTGCCCGTGGCGGCTCTTATCGACGACAAGATACTCTGCATGCATGGTGGACTCTCCCCTGAATTGCACAACTTGAACCGGATAAGGACTTTGCGCCGTCCGGTCCAAGTGCCCGACAGTGGTCTGCTATGTGATCTTCTCTGGTCTGATCCCTGCGGAGACATTCAAGGCTGGGGAGGAAGCGAACGCGGAGTTTCGTGTACTTTCGGCCCTGATAGGGTCACTGAGTTTCTGAGGAAGCATGATCTTGATTTGATCTGTAGAGCACATCAGGTTTCGTATTCTATATGA 753 0.4701 MERGVVDGIINRLLEVRGKPGKQVQLSEAEIRQLCLVSKDIFLRQPNLLELDAPIKICGDIHGQYYDLLRIFENGGFPPRSNYLFLGDYVDRGNQSLETISLLLAYKIKYPQNIFLLRGNHECASINRIYGFYDECKRRYSVKLWKTFTDCFNCLPVAALIDDKILCMHGGLSPELHNLNRIRTLRRPVQVPDSGLLCDLLWSDPCGDIQGWGGSERGVSCTFGPDRVTEFLRKHDLDLICRAHQVSYSI 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g01961 250 Pfam Serine-threonine protein phosphatase N-terminal domain 6 51 IPR031675 -
Adu09g01961 250 Pfam Calcineurin-like phosphoesterase 54 246 IPR004843 GO:0016787
Adu09g01961 250 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 1 246 - -
Adu09g01961 250 ProSitePatterns Serine/threonine specific protein phosphatases signature. 117 122 IPR006186 GO:0016787
Adu09g01961 250 SMART pp2a_7 26 250 IPR006186 GO:0016787
Adu09g01961 250 Gene3D - 10 249 IPR029052 -
Adu09g01961 250 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 246 - -
Adu09g01961 250 SUPERFAMILY Metallo-dependent phosphatases 19 247 IPR029052 -
Adu09g01961 250 PRINTS Serine/threonine phosphatase family signature 179 206 IPR006186 GO:0016787
Adu09g01961 250 PRINTS Serine/threonine phosphatase family signature 54 81 IPR006186 GO:0016787
Adu09g01961 250 PRINTS Serine/threonine phosphatase family signature 150 176 IPR006186 GO:0016787
Adu09g01961 250 PRINTS Serine/threonine phosphatase family signature 236 250 IPR006186 GO:0016787
Adu09g01961 250 PRINTS Serine/threonine phosphatase family signature 83 110 IPR006186 GO:0016787
Adu09g01961 250 PRINTS Serine/threonine phosphatase family signature 116 140 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g01961 Adu-Chr9 98878129 98880280 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g01961 33 242 Calmodulin-binding Proteins AT5G63870 32.000 1.07e-32 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g01961 K06269 - gmx:100791655 449.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00268 06 3279930 3282684 Adu09g01961 09 98878129 98880280 ECH
Adu09g01961 09 98878129 98880280 Adu09g01961 09 98878129 98880280 ECH