Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g01924 ATGAATTCATCAGAAGTTGAAGAAGAAGAAGAAGAAGCACAAGATCATCATGGAACCAAAAAGTCTTATGATTGCACATTCTGCAAGAGAGGCTTCACAAATGCTCAAGCTTTAGGGGGTCACATGAATATTCATAGAAGAGATAGGGCCAAGAACAAGCCTCATCTTCTTCATCACTCACCAAATTCCTCAAACAATAATCATCAAGAGGGAGAATTCATGTCCCTAAAATTCTCATCATCATCAACCCATGCTTTCGATTCTCAAAGGACCTATGACAACATGTATTTTCATCCACCTCCACCACCACCACCTAACGATTATCAAGTTAGGAAACATCAGCAACATGAACCACCATTTCAATTAGATCAATTTCATCATCAGCCTATGATGAATCTCAAGAATCAAGAGCTTCAAGACTCGGCCACCATCATCCATAATTCTCAATCACAACTCAAACCTAATAATCAAGAAGATTTGGATGGCATATTGTAA 495 0.3838 MNSSEVEEEEEEAQDHHGTKKSYDCTFCKRGFTNAQALGGHMNIHRRDRAKNKPHLLHHSPNSSNNNHQEGEFMSLKFSSSSTHAFDSQRTYDNMYFHPPPPPPPNDYQVRKHQQHEPPFQLDQFHHQPMMNLKNQELQDSATIIHNSQSQLKPNNQEDLDGIL 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g01924 164 SUPERFAMILY beta-beta-alpha zinc fingers 20 49 IPR036236 -
Adu09g01924 164 ProSiteProfiles Zinc finger C2H2 type domain profile. 23 50 IPR013087 -
Adu09g01924 164 ProSitePatterns Zinc finger C2H2 type domain signature. 25 45 IPR013087 -
Adu09g01924 164 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 2 161 - -
Adu09g01924 164 MobiDBLite consensus disorder prediction 1 22 - -
Adu09g01924 164 PANTHER OS07G0101800 PROTEIN 2 161 - -
Adu09g01924 164 Gene3D Classic Zinc Finger 5 85 - -
Adu09g01924 164 MobiDBLite consensus disorder prediction 92 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g01924 Adu-Chr9 96826907 96827698 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g01924 21 78 C2H2 Transcription Factor Family AT3G09290 51.724 2.90e-16 70.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Adu09g01924 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g01924 - - aip:107615854 252.677