Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g01915 ATGGCTAGCACCTTCAACAATGTCAAGGACATTGATGCATCCCATGACAACTTGAGCTATAGGATCAAGGTGCGTGTGATTAAGATTTGGACTCTATCTACGGCTGAGCAGAAATTTCAAAAGCCAATGCTGGAGCTGGTGGTCATGGATAATCAGGGAGATCGGATCCAATGTTCAATTCGAAACCCTCATAGGAGGTTATTTGAGGCCGACCTTACCGAGGGGAAAATATACACTATCTCCAATTTTTCAGTTGCTCAGAATGACCTCAAGTACAAAGCCACCAATCATGTTAGCAGAATATATTTTAAGAGAGATACCCAGCTTAGGGTGGTTCAGGATCCTCTATTCCTTACACATATTTTTTGCTTTGTGCCCAATGAAGTAATACTTAACCACACCAATGCTCAGTCCCATTTAATTGATGTAATTGGGCTCCTCACTGCTAAGGGTGACATTATTGAATTCACAAAGAATGGAAAGAAGTCCATCTACATTGTCATAGAACTTGATGACCTGAGAGGAAATGGTACCATTCGATGTACTTTGTGGGAAGAATTTGCAACTAAATTAGTAAAGCATATGGAAGAGACACCTACCTTAGAATATATACTTATTATACAATTTGCGAAGTTTAACCTATTCAAAGAAAATCATGGCAAGTGGCAACCCTATTCGGCGCCACAACACTCAGGCCATGTCGATCACCACGGATGGCAACAGGTTGAACCTAGACCAGTGGATGTGACAAGAGAACATGGGCACAAATACGGGGAAGGATTTGCCGTGGATCATTCATGGGAGTTGGGTATAATGGGTATATCAAACACCAACTACAATTCCATTCTGCACATCAACGATGATTTTCAAGAGGTCAAGGATTTTCGCAAGAGTGTCATAATATCAGGTGTACCTGCTGCAACTCAAGTTTCTCAAATACCGGGAGAGCCGACATATTCACTCGAAGAGGACCTACTTAACCATTCCATTTATAAGCCCATCTCCGAGCTGAAGGATTCAATTGAGAATGGGCTCTTTGTCACTATTGGCACGGTTATATCCATTGATCCTAAGAATGGGTGGTGGTACAAAAGTTGCAAGCATTGCTTCCATTCTTTACAAGAAGCCGAGAACTCATACCACTGTGCTACGTGTGAGACATACCCATCGTCTCACACTCCAAGGTTTAGCATAAACATGCGAGTTGCTGATGAGACCGATACGGCTTCTTTCCTACTGTACGATAAGGAGGCGTCCAAATTCCTTGGTATATCCGCATCTGATCTCAGACTCGCACAACTAACCAGGGGTGGAGTTAACGAGGAATATCCAATAGAGCTTAACTCACTGATGGGAAAGAAATTTCTGTTCAAAGTATCTGTCAAAATGGAAGATCTTAATGCATTCCAACCATGTAGGATAATTGTTACTAAGCTCTGTGCGGACAACTCTGTTATCACAAAATTTACTGCGAAGACTAGCTTTGACGAGCACAATATGGGTATGGAGAACTCTGAACTGCTGAGCATGAACACTGACTCTGCTGAGACCCCAAAGGGTACAACCTCTCCCTCTGTTGAGACTTTATCCCAGGGAACAAATGATGGATTCTCAACTCCAAATGATAAAATTATCACTGGTGGGTGGTCTAAGAAGCTGATCGACGTGTACCCCGATTCTGCCCGTGCATCATCATCATCCAAATGCAGGAAAGTGACAGAGGGTGCCACTGCAACCATTGTCGAGATTCATGATGAGTAG 1761 0.4282 MASTFNNVKDIDASHDNLSYRIKVRVIKIWTLSTAEQKFQKPMLELVVMDNQGDRIQCSIRNPHRRLFEADLTEGKIYTISNFSVAQNDLKYKATNHVSRIYFKRDTQLRVVQDPLFLTHIFCFVPNEVILNHTNAQSHLIDVIGLLTAKGDIIEFTKNGKKSIYIVIELDDLRGNGTIRCTLWEEFATKLVKHMEETPTLEYILIIQFAKFNLFKENHGKWQPYSAPQHSGHVDHHGWQQVEPRPVDVTREHGHKYGEGFAVDHSWELGIMGISNTNYNSILHINDDFQEVKDFRKSVIISGVPAATQVSQIPGEPTYSLEEDLLNHSIYKPISELKDSIENGLFVTIGTVISIDPKNGWWYKSCKHCFHSLQEAENSYHCATCETYPSSHTPRFSINMRVADETDTASFLLYDKEASKFLGISASDLRLAQLTRGGVNEEYPIELNSLMGKKFLFKVSVKMEDLNAFQPCRIIVTKLCADNSVITKFTAKTSFDEHNMGMENSELLSMNTDSAETPKGTTSPSVETLSQGTNDGFSTPNDKIITGGWSKKLIDVYPDSARASSSSKCRKVTEGATATIVEIHDE 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g01915 586 Gene3D - 6 114 IPR012340 -
Adu09g01915 586 SUPERFAMILY Nucleic acid-binding proteins 333 480 IPR012340 -
Adu09g01915 586 Pfam Replication factor-A C terminal domain 347 478 IPR013955 -
Adu09g01915 586 Gene3D - 118 303 IPR012340 -
Adu09g01915 586 PANTHER REPLICATION FACTOR A 1, RFA1 19 197 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Adu09g01915 586 PANTHER BNAC01G35430D PROTEIN 19 197 - -
Adu09g01915 586 CDD RPA1_DBD_A_like 21 107 - -
Adu09g01915 586 Pfam Domain of unknown function DUF223 45 135 IPR003871 -
Adu09g01915 586 SUPERFAMILY Nucleic acid-binding proteins 135 218 IPR012340 -
Adu09g01915 586 Gene3D - 326 487 IPR012340 -
Adu09g01915 586 PANTHER REPLICATION FACTOR A 1, RFA1 346 486 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Adu09g01915 586 PANTHER BNAC01G35430D PROTEIN 346 486 - -
Adu09g01915 586 MobiDBLite consensus disorder prediction 512 541 - -
Adu09g01915 586 CDD RPA1_DBD_C 334 467 IPR013955 -
Adu09g01915 586 SUPERFAMILY Nucleic acid-binding proteins 5 115 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g01915 Adu-Chr9 96276468 96280811 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g01915 19 476 Core DNA Replication Machinery Family AT5G08020 21.795 7.26e-17 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g01915 - - ahf:112707100 738.413