Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g01889 ATGGCCGGGTTAGAAGATTTTTGTGCAGAGCAAGAAGCACCGTTGTACAGTGAAGGAATGAACGTGTTGCATGATTTAGATCCCCAGGAAAGGACACTCGAAGATGTATCTGATTGTGTTTCTGATTTCGATGAATATTTTGGTGACAATTTCTATGATGACTGGGACAACAGAGCAATTAACGGGATTGCGGACCTCCAAATCGTGAAGTTTAAAGAGATAACTGCAGATCAGATTCGAAGGCTTCATTTTCCAGATCGATCAGTTGCCTTTTCATTCTACAACTTGTATGCTAAAATGAATGGTTTTTCTGCAAGGAAGAGTCGGATACGACGCAATGTGAACAATGATGTGACACAACAAGCATTTGTGTGCTTTAGACAGGGTTTTAGAGATTTGTGCTCTGATAATGACGCCGCTCGACACAAACAGGAACCAAAGCCTACAACTAGATGTGGATGTGGGGCAGAGATGCGTGTGCATATACATGAGGAGACAGGCAGATGGATTTTCTTCCGGTGTATTTCCCAAATGAGATCCAGAGAAGCACAGTCTGATTTACAGTCAATTGTTGGAGACCTAGTACTACAAAGCCCGTTGCATGATTTGGAGAGGTCGGCAGCAAACATGCTCACCAGAGAGATATTTTTGTTATTTCGTCCAATGCTTTCGAGAGCTTGCACTTTGAAGATTCGTTCGTGCACGTACACACCAACTTTTGAGATTTACACGCTTTCACGTTCTGGAAGTTTGCATAAAGAGTGgtggtccaaaaATGCACGTTCAAGGGTTCATGCATTCATGGATAATGGCCCCTTTTGCTGGGATGCAATGGTCACTTGCCGTAACTGGATGCTAAGCGATCTTTGCAGGGAGTTATGCCTTCTTGGTTCTGCTGGTGATGCTGAATTCTCCGAACTTAGGGATAAATTTCAGAATGAGATAGTACTTCTTAAGGAACAAAAAAAAGGTATGCAAGCTGACAAGGAAAGGACCGAGCCACATGCAGAGTCAACCACCCTTGAGGGCTGCATTAGGAACCCCCTGATCTGCGAGGTGTTAAGCGGTGTGGTGTTTGTCGCCGCGTCGGGCATAACCGGGGGTCATAGCCCCCAAGACGATTGTTATAGGCTGGATTGGACGGATGTGGAATACAGTGGTTTCTTTTGGGATGGTAATGGTGGCAGTGACAACTTTGACATGGAGATCCCTGTCTCAAACCCATATTACAGTTCGCAACCCTAA 1245 0.4442 MAGLEDFCAEQEAPLYSEGMNVLHDLDPQERTLEDVSDCVSDFDEYFGDNFYDDWDNRAINGIADLQIVKFKEITADQIRRLHFPDRSVAFSFYNLYAKMNGFSARKSRIRRNVNNDVTQQAFVCFRQGFRDLCSDNDAARHKQEPKPTTRCGCGAEMRVHIHEETGRWIFFRCISQMRSREAQSDLQSIVGDLVLQSPLHDLERSAANMLTREIFLLFRPMLSRACTLKIRSCTYTPTFEIYTLSRSGSLHKEWWSKNARSRVHAFMDNGPFCWDAMVTCRNWMLSDLCRELCLLGSAGDAEFSELRDKFQNEIVLLKEQKKGMQADKERTEPHAESTTLEGCIRNPLICEVLSGVVFVAASGITGGHSPQDDCYRLDWTDVEYSGFFWDGNGGSDNFDMEIPVSNPYYSSQP 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g01889 414 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 71 176 - -
Adu09g01889 414 Pfam FAR1 DNA-binding domain 92 171 IPR004330 -
Adu09g01889 414 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 71 176 - -
Adu09g01889 414 Coils Coil 308 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g01889 Adu-Chr9 94709271 94711972 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu09g01889 FAR1 2e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g01889 - - adu:107466227 360.533