Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g01882 ATGGATCACGTTATCGGTGGAAAATTCAAGCTTGGGAGAAAGATTGGAAGTGGGTCATTTGGAGAGCTCTACTTGGGTGTTAATGTGCAAAGTGGAGAGGAAGTTGCTGTCAAGCTGGAATCTGTGAAGACCAAACATCCACAACTTCATTATGAGTCAAAATTGTATATGCTTCTTCAAGGCGGAACTGGTATACCCCATTTAAAATGGTTTGGAGTTGAGGGTGACTACAATGTCATGGTGATTGACCTTCTTGGACCAAGTCTGGAAGACTTATTTAACTATTGCAACAGGAAATTTTCGCTGAAAACAGTTCTGATGCTTGCAGATCAACTCCTAAACAGAGTTGAGTACATGCACTCCCGGGGTTTTCTGCACCGTGATATAAAACCCGACAACTTTTTAATGGGTTTGGGCCGCAAGGCAAATCAGGTTTACATAATTGATTATGGTCTTGCAAAAAAGTATCGTGATCTTCAAACCCATAAGCATATACCATACAGGGAAAACAAAAACCTTACTGGAACTGCACGCTATGCAAGTGTTAATACTCATCTTGGAGTTGAACAAAGCAGAAGAGATGATCTAGAATCTCTTGGTTATGTGCTCATGTACTTCTTGAGAGGAAGTCTTCCTTGGCAAGGCTTGAAAGCTGGGACTAAAAAGCAGAAGTATGACAAGATAAGTGAAAAGAAGATGCTTACTCCAATAGAGGTCTTGTGCAAATCACACCCACTGGAATTCACATCCTACTTTCACTACTGCCGGTCATTGCGTTTTGAAGATAAGCCTGATTATTCATATCTCAAGAGACTCTTCCGTGACCTATTCATACGAGAAGGTTATCAATTTGACTATGTATTTGACTGGACTATATTGAAGTATCCACAAATTGGATCCAGTTCTAGAGCTCGAATGGAAAATCTTTCATCGGATAGTGATTATTGTATTTATAACTTAGGTGGGCCAGAGATTCGGGAAAGATTATCAGGTGCCGTTGAGGCATTTGCAAGAAGGAATGGCTCTGGACTAAATCTGCATAGGTCTTCAGATGATTTGCCATCTTCCAAAGATGTGCAAGCTGATTCGGAGAGAACTCGTAGCTCTTCTCGCAATGGCAGTGCCTCAAAAAGGCCTGTTGTTTTGAGCAGCCGGCCTAGTTCTTCTGGTGAGCCTAGTGAGAACCGTTCAAGTAGGCTGCTTGCAAGCAGCAGCCGTCTATCTACAACTCAGAGGATTCAACCAGGTCTGGAGTCCAAAACGTCATTCACCCGTGCATCCGGGACAAGGGGAGGCCGTGATGACACACTCAGGAGCTTTGAACTCCTGTCAATTGAACAAGAGCTCGGGGGAGAAATTAGAGTGATTGCTGAAGAAAGTGAGGAAACTGGGGAGTTGGTGTCTTTGGACCCAGAGATGTTGCAGCTTCAGGAGGTTTCTTCTTTTGCACTGAAATCGAATCCTGGTGTTGCTGAGGAGCTATTCTCACAGTGGCTTTCGCTTCCTGATACTTGCCGCCTGGTCAAGTCATTGATAGATGATGCAAAGGCAGGAGCTTTGTCATGTGCACTTGAGAACTCACCAACCGCAAATGCTCTGGCAGGCAATTCAGTACCTTCGTTGTTTCCAGCTGGTACGACACCGCCGCTTTCACCACGAAGTTCAGCTGGTTCCCCACGTACTATGAAACAGAGAACTAGTCCTTCTTCATTAAGTTCTCCACTCAAAGTAGTCAGCGAGCCAGTACGGGAGATCATTCCACAGTTCTACTTCAAAAATGGTCGTCCTCCTCCGGATGACATGAAAGAGCATTTCCTATTTCAAATTGACAATCGATTTGTTGGTCATGTGGATGGTCTGCAGTTACATGAATTTAAGTCTATTACGAAAGAGATTTGCAAACTTCCGTCATTCTTCTCTGCTGCTCTCTTCAGAAAGATTGATGTCAATTATGCTGGAGCAGTAACAAGGGAACAATTTATTGACTATTGGGTTCGAGGCAATATGTTGGCTATGGATTTAGCTACACAAATATATACCATACTGAAGCAACCTTACCGGACATACCTAGTGCAGGATGATTTCAAACCTGTCTTGAGGGAGTTATTGTCCACTCATCCTGGGTTGGAGTTTTTGCAAAGCACACCTGAATTTCAGGAAAGATATGCTGAGACTGTGATACATAGAATATTTTACTACATGAATAGATCGGGCAATGGCCGACTTACACTACGGGAGTTGAAACGTGGGAACCTCATTGATGCCATGCTGCATGTTGATGAGGAAGAGGATATAAACAAAGTTCTGAGGTACTTCTCATATGAGCATTTTTATGTCATTTACTGCAAATTTTGGGAGCTCGACACAGATCATGACTTTTTCATTGATAGAGAGAACCTTATTAAATATGGGAACCATTCTCTTACATATCGGATTGTTGATAGAATATTTTCTCAGGTTCCACGGAAATTTACCAGCAAAGTTGAAGGGAAGATGAACTATGAAGATTTTGTCTATTTCATACTTGCAGAGGAAGATAAGTCGTCTGAACCTAGTCTAGAATACTGGTTCAGATGCATTGATTTGGATGGGAATGGAGTGCTGACACCAAACGAAATGCTGTTCTTTTATGAGGAGCAGTTGCATCGGATGGAGTGCATGGCCCAAGAGCCAGTGCTTTTTGAAGATATATTATGTCAGATTGTTGATATGATTGGACCAGAGAATGAGGGATTTATTACATTGCGAGATGTTAAAGGCAGCAAACTTTCTGGCAACGTTTTCAATATTCTTTTCAATCTGAACAAATTCATTGCTTTTGAGACCCGTGATCCGTTTCTTATACGTCAGGAGCGTGAGGATCCAAGTATGACAGAAGGCTCCATTCTGAGATTAATTAGGTGA 2904 0.4236 MDHVIGGKFKLGRKIGSGSFGELYLGVNVQSGEEVAVKLESVKTKHPQLHYESKLYMLLQGGTGIPHLKWFGVEGDYNVMVIDLLGPSLEDLFNYCNRKFSLKTVLMLADQLLNRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYIIDYGLAKKYRDLQTHKHIPYRENKNLTGTARYASVNTHLGVEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYDKISEKKMLTPIEVLCKSHPLEFTSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILKYPQIGSSSRARMENLSSDSDYCIYNLGGPEIRERLSGAVEAFARRNGSGLNLHRSSDDLPSSKDVQADSERTRSSSRNGSASKRPVVLSSRPSSSGEPSENRSSRLLASSSRLSTTQRIQPGLESKTSFTRASGTRGGRDDTLRSFELLSIEQELGGEIRVIAEESEETGELVSLDPEMLQLQEVSSFALKSNPGVAEELFSQWLSLPDTCRLVKSLIDDAKAGALSCALENSPTANALAGNSVPSLFPAGTTPPLSPRSSAGSPRTMKQRTSPSSLSSPLKVVSEPVREIIPQFYFKNGRPPPDDMKEHFLFQIDNRFVGHVDGLQLHEFKSITKEICKLPSFFSAALFRKIDVNYAGAVTREQFIDYWVRGNMLAMDLATQIYTILKQPYRTYLVQDDFKPVLRELLSTHPGLEFLQSTPEFQERYAETVIHRIFYYMNRSGNGRLTLRELKRGNLIDAMLHVDEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFFIDRENLIKYGNHSLTYRIVDRIFSQVPRKFTSKVEGKMNYEDFVYFILAEEDKSSEPSLEYWFRCIDLDGNGVLTPNEMLFFYEEQLHRMECMAQEPVLFEDILCQIVDMIGPENEGFITLRDVKGSKLSGNVFNILFNLNKFIAFETRDPFLIRQEREDPSMTEGSILRLIR 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g01882 967 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Adu09g01882 967 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu09g01882 967 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 460 959 - -
Adu09g01882 967 Pfam EF-hand domain pair 777 877 IPR002048 GO:0005509
Adu09g01882 967 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
Adu09g01882 967 SUPERFAMILY EF-hand 620 750 IPR011992 -
Adu09g01882 967 Gene3D - 772 943 - -
Adu09g01882 967 Gene3D - 582 683 - -
Adu09g01882 967 SUPERFAMILY EF-hand 761 917 IPR011992 -
Adu09g01882 967 Gene3D - 684 771 - -
Adu09g01882 967 ProSitePatterns EF-hand calcium-binding domain. 861 873 IPR018247 -
Adu09g01882 967 ProSiteProfiles EF-hand calcium-binding domain profile. 848 883 IPR002048 GO:0005509
Adu09g01882 967 Gene3D Transferase(Phosphotransferase) domain 1 1 315 - -
Adu09g01882 967 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu09g01882 967 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu09g01882 967 MobiDBLite consensus disorder prediction 351 365 - -
Adu09g01882 967 Pfam EF-hand domain 673 762 IPR041534 -
Adu09g01882 967 MobiDBLite consensus disorder prediction 543 574 - -
Adu09g01882 967 MobiDBLite consensus disorder prediction 366 429 - -
Adu09g01882 967 PANTHER PHOSPHATASE 2A REGULATORY SUBUNIT-RELATED 460 959 - -
Adu09g01882 967 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Adu09g01882 967 CDD STKc_CK1_delta_epsilon 8 282 - -
Adu09g01882 967 MobiDBLite consensus disorder prediction 344 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g01882 Adu-Chr9 94326746 94338789 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g01882 464 959 EF-hand Containing Proteins AT5G28850 73.589 0.0 776
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Adu09g01882 Pkinase 3.6e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g01882 K11583 - gmx:100804366 901.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g01882 09 94326746 94338789 Adu09g01882 09 94326746 94338789 ECH