Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g01815 ATGTCAGGTATATTTACGGACACTGAGATGAATGAGCAATACCAGGAGGACGATGACTTTAACCAACAAGAAGAGCTAGTAAGTGACCAAGATATGATGGATGAACAGAATGAATTTGAAGAAGACTTCAGAGATGAATTTACTGAGGGAGCGTTTTTTTCTGGATCTGATCAGTCAAAAGATATCCTTGAAGCCGCTTATGCGGTTGACTCCGTGCAAGACATTACAACTTTGAAATTTAGTGAGAATTTTGCGGAGGAAATTGGCAAATACCACTTTTCTACTTTGCAGCTTGCATTTGATTTTTATATGAAGTACTCAAAGTCGAAGGGCTTTAGTGCAAGGAAGAGCAAGACCTTCAAGAATAGTACTGGTGAGATTTACAAACAAAAGTTTGTATGTCATAGGCAAGGATTTAGGATGGAGAAATATTACACGATGGAAAAAAGGAAAAAGGAGCCTAGATTAGAAACAAGAACTGGATGTGATGCCCGAATGGATGTTAAATTTGTACCAGAAAGTGGAAGATGGCATACCTTTTATTTCTCTGACGAACACAACCATGATCTATTGGATACACAATTCAGTGCTATGTTGCCTGCCCACAGAAAAATGTCAGAGGCAGATATTATGCAAACGATGAACATGCTAAAGTCAGGGATTAGAACTTCACAGATATTTGGTCTTCTAGCTAGTCAAGCAGGCGGGTATGAATTTGTTGGCTATGGTCCCAGAGATATGTACAATGAGATTGCTCGGCAAAGGCGTCAAATTCCTGGTGATGCAGCGCGAGTGTTGAAGAAGTTGGAGGATATGCGGTTGAAGGATCCACAATTATATTTCAAGGCATGTCATGATTCAAGAGAATTTAATGCTGATTATGAATCTACACGTGGGGTGCCTGTCATGCAAACTTGTATAGAGCTACTAGAGAGATATGCTGCTGAGTTATACACTCATGAGATATTTCTTTTCTTTCGGCCATTTCTCTCTAGAGCTGGATCAATGCGGGTGCTAAACATAGATAATACCGATTATTGCATAAAGTATACTGTGTGTAAGCATGGGAAGCCCGATTTTATGTGGACCGTTGATTTTCGTCAAGAAGAAATTATCTTCATGTGTACCTGTTTAAGAATGGAGTCATTTGGTATTCCCTGCGAACATATTGTGAAAGTTCTGATTGACAGAGACATCTGTGAGATTTCCCGGTCATTGGTATTGGATAGATGGACAAAAAAGGTTAAATCAGCACTCAATGATCCAAGTGGGTTCACCAGGGATGCTGTTGTTATTAGTCGTCAAAGTGCCTTGGTGGAATTTTCTAAACAATTGGCTGCAGTTGCTGCTAAAGCTGCAGACGAAGGCACTAATCAACCTCAATCAGGTGTAGCTAAAAGTAGCAATCCGTATGTGAATCAAAGCGGTGTAGGCTCAGGACAACCATCTAGGAAGAAGCACCAACGTTGTAGTGTTTGTCAAATGGAAGGACATAAGAAGACAAAATGTCCTTGGCAAAAGGACATTGACAACAACGTTATTGAAGACGAAGCTAATGGTTCAGATGATGGCGACGTATATCCAGAACCGACAGCTGAGTTAGATAGTGATAACTAG 1617 0.4026 MSGIFTDTEMNEQYQEDDDFNQQEELVSDQDMMDEQNEFEEDFRDEFTEGAFFSGSDQSKDILEAAYAVDSVQDITTLKFSENFAEEIGKYHFSTLQLAFDFYMKYSKSKGFSARKSKTFKNSTGEIYKQKFVCHRQGFRMEKYYTMEKRKKEPRLETRTGCDARMDVKFVPESGRWHTFYFSDEHNHDLLDTQFSAMLPAHRKMSEADIMQTMNMLKSGIRTSQIFGLLASQAGGYEFVGYGPRDMYNEIARQRRQIPGDAARVLKKLEDMRLKDPQLYFKACHDSREFNADYESTRGVPVMQTCIELLERYAAELYTHEIFLFFRPFLSRAGSMRVLNIDNTDYCIKYTVCKHGKPDFMWTVDFRQEEIIFMCTCLRMESFGIPCEHIVKVLIDRDICEISRSLVLDRWTKKVKSALNDPSGFTRDAVVISRQSALVEFSKQLAAVAAKAADEGTNQPQSGVAKSSNPYVNQSGVGSGQPSRKKHQRCSVCQMEGHKKTKCPWQKDIDNNVIEDEANGSDDGDVYPEPTAELDSDN 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g01815 538 Pfam FAR1 DNA-binding domain 101 191 IPR004330 -
Adu09g01815 538 MobiDBLite consensus disorder prediction 489 514 - -
Adu09g01815 538 ProSiteProfiles Zinc finger SWIM-type profile. 360 398 IPR007527 GO:0008270
Adu09g01815 538 MobiDBLite consensus disorder prediction 515 538 - -
Adu09g01815 538 MobiDBLite consensus disorder prediction 456 488 - -
Adu09g01815 538 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 81 282 IPR031052 GO:0006355
Adu09g01815 538 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 289 458 IPR031052 GO:0006355
Adu09g01815 538 MobiDBLite consensus disorder prediction 1 23 - -
Adu09g01815 538 MobiDBLite consensus disorder prediction 456 538 - -
Adu09g01815 538 Pfam SWIM zinc finger 375 395 IPR007527 GO:0008270
Adu09g01815 538 PANTHER OS03G0181600 PROTEIN 81 282 - -
Adu09g01815 538 PANTHER OS03G0181600 PROTEIN 289 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g01815 Adu-Chr9 88799342 88801696 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu09g01815 FAR1 6.2e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g01815 - - adu:107457868 541.576