Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g01814 ATGAATGAGCTTGGAGAGATACTCCGAGAAGCAGAGCATCGATGGCTTCGACCTGCTGAAATAAGCGAGATACTTCGCAATTATCAGAGGTTTGAGTTAACACCTGATCCACCTGTCAGGCCTCCAGCTGGATCACTGTTCTTGTATGATCGAAAAACACTTCGTTATTTTCGCAAGGATGGTCATAGGTGGAGGAAGAAAAAAGATGGGAAAACTTTTAGAGAAGCTCATGAAAAGTTGAAGGCTGGTAATGTTGATGTCCTGAATTGTTACTATGCTCATGGGGAGGATAATGAGAACTTTCAAAGGAGAAGTTATTGGATGCTTGATGAGCAGTTAGAGCACATTGTTCTTGTACATTATCGTCATATTAAAGAGGGTTACAAGTCCGGCGTCTCACATTCCCCTGCAGCTCCTGTATCCTTGGTTGGTAGCTCTCGAACAAGTTCAGCGCCTTCCTCTGTCAAAATAGAGTCACCTATATCTGTATTTCAAACATCTGTTTCATCAACTGCAAATGAAGTTGAGCAGGCTGGACGAGCTTCAGTGTGTGATGATCGGCACTCAGAGAATGGTCCTCAAGTCTTGTCTCATGCTCGGCCTATTGACACTTCAATTCCTCACAATGCACGGCTGCTTGGACATGAAGCCACTGGTTTTGCTGAGTTGATGAGGGACCCTCTTATTTCATGGTCATCTTCTCTCCCTAGCTTTTATCCTGGCTCTGGCTTATCATCATGTGCAACAATAGAGAACACTAGTAGAACCACAGTTGATATGAATGATGGAGAACTTCATGTAGAAGCAGATCCCATAAATCAGCATGTTCAAAATTTCAGAGATAGGCTCATGACTGATGTGTGCATACAGCCAGTTACAGGAATGTTACATGCTGTAAATCAGGTGCAAAAGGAGCATGATTTAGTTTCATTGCGTACCCAATTCCATCATCATCATCCTGTTTTAGCTACAAAGAACGTAGTTGAACAAAAATTCCAAGATGGTGGTTTGGACAATGATGACCCACAAAATGTTGAATCTGGGGAACTGAAGAAGCTTGATTGTTTTGGATGGTGGATGGATAAGGAGATAGTATCATTGACTTTGCTCCAGATTGGGCATATGCTGGGGTTAGAACAAAGAGAGGAAACTGTGATTGCACTAGTCAAATTAGGTGCAATCCCAGGTCTTGTTGATGACCCAACATCAGCATTTCCTCGAGGGGAAACAGCAGCTGATTTAGCTTCAAGTAGAGGATATAAAGGTATTGCTGGATATCTGGCTGAGGCAGATCTTATGACAATGGATGAGCAGCACTATCTAGGAGAGTCACTTGCTGCTTTTCAAAAATCAGCTTATGCTGCTGCTTCAATCCAAGCAGCCTTTAGAGCAAGATCATTCTGTCAAAGACAACTAGCCAAGAATAGCAGTGATATTTCTGAAGATGCACTTGACCAAGTTGCTGATTCTTTGAACAAGGGAAGAAAAGATTTTTCGAGAATACGCACCGGCATTGTAAAAATTCAGGCTCATGTTAGAGGTCACCAAGTTCGAAAGCATCGGCTTGCACTGTGGCTGGAAATCCTGAGAAAAATTGATGAATATGAATTTCTTAGCATTGGCAGGAGACAGAAATCAGCTGATGTGAACAAAGCTCTGGATAGAGTAAAGTCTATGGTTCGCAATCCAGAGGCCCGTCATCAGTACATGAAGCTTGTCATGAAATCTCAAAATTTTAAGCAAATCAGATTGGAACAGACTGGTGATGGTGGTAGCAGTCAACCACAGCCTGTTGAGTAG 1800 0.4256 MNELGEILREAEHRWLRPAEISEILRNYQRFELTPDPPVRPPAGSLFLYDRKTLRYFRKDGHRWRKKKDGKTFREAHEKLKAGNVDVLNCYYAHGEDNENFQRRSYWMLDEQLEHIVLVHYRHIKEGYKSGVSHSPAAPVSLVGSSRTSSAPSSVKIESPISVFQTSVSSTANEVEQAGRASVCDDRHSENGPQVLSHARPIDTSIPHNARLLGHEATGFAELMRDPLISWSSSLPSFYPGSGLSSCATIENTSRTTVDMNDGELHVEADPINQHVQNFRDRLMTDVCIQPVTGMLHAVNQVQKEHDLVSLRTQFHHHHPVLATKNVVEQKFQDGGLDNDDPQNVESGELKKLDCFGWWMDKEIVSLTLLQIGHMLGLEQREETVIALVKLGAIPGLVDDPTSAFPRGETAADLASSRGYKGIAGYLAEADLMTMDEQHYLGESLAAFQKSAYAAASIQAAFRARSFCQRQLAKNSSDISEDALDQVADSLNKGRKDFSRIRTGIVKIQAHVRGHQVRKHRLALWLEILRKIDEYEFLSIGRRQKSADVNKALDRVKSMVRNPEARHQYMKLVMKSQNFKQIRLEQTGDGGSSQPQPVE 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g01814 599 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 2 5 369 - -
Adu09g01814 599 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 2 380 437 - -
Adu09g01814 599 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 380 437 - -
Adu09g01814 599 Pfam CG-1 domain 10 123 IPR005559 GO:0003677
Adu09g01814 599 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 5 369 - -
Adu09g01814 599 ProSiteProfiles IQ motif profile. 501 530 IPR000048 GO:0005515
Adu09g01814 599 MobiDBLite consensus disorder prediction 181 200 - -
Adu09g01814 599 ProSiteProfiles CG-1 DNA-binding domain profile. 4 130 IPR005559 GO:0003677
Adu09g01814 599 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 438 581 - -
Adu09g01814 599 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 2 438 581 - -
Adu09g01814 599 SMART CG_1_2 7 125 IPR005559 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g01814 Adu-Chr9 88767892 88775424 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g01814 374 581 CAMTA Transcription Factor Family AT5G64220 31.494 2.11e-29 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Adu09g01814 CG-1 6.4e-49 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g01814 K21596 - adu:107466080 525.783