Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g01760 ATGGAGCCTAATAACTACAATTCTTCTTCTAATGTTGTTGTCACTGATGATGTGAAGAAGCCATTATTAGAAGAGAAAAAGATGGGTACAATAATAAGATACAAAGAATGTCTCAAGAACCATGCAGCTTCACTTGGTGGCAATGCAACTGATGGATGCGGCGAGTTCATGCCCTGTGGTCAACAAGGTACCATTGAAGCTCTCATCTGTTCTGCATGCAATTGCCATAGAAACTTTCACAGGAAAGAGATTCAATCTGAAGCTCATCATCATAAATATCAAGTGGTGAAGCATATTTTTGCACACTCATCAATGAGTCTTTCTGATCAATCTTATGATCATGATCATAACGACAATAAGGATTATTGTGAAAAAGGGGTGGTGAAGATGAAGAAGAGGTTCAGGACAAAGTTCACACAAGAACAGAAGGCCAAGATGCTCGATTTCGCAGAGAAGGCAGGATGGAAGATACAGAAGCTAGATGAATCTATGGTGAACAAGTTTTGCCAAGACCTTGGGATCAAGAGAAGGGTACTCAAGACCATTGCATCGCCGCCTCTGCAGTGCGCCGCGCACGTCACTACTCTCCCGTCGCACCGCCAGCTAATCTGCGTCACTCGCATTCACGCTGCTCGCCTGTCACATCCTCGTCGCTCGCGGCTTGCATACCCAAGGCCAAGCCCGCATTTGCACCACCGCAACCTCCATCTCGTCAATCCTTTGCGTAGCGCTGGTGCCCTCCGCAACCAATTTCCATCGCCACAAGGCGCTCTCTGCTAG 780 0.4667 MEPNNYNSSSNVVVTDDVKKPLLEEKKMGTIIRYKECLKNHAASLGGNATDGCGEFMPCGQQGTIEALICSACNCHRNFHRKEIQSEAHHHKYQVVKHIFAHSSMSLSDQSYDHDHNDNKDYCEKGVVKMKKRFRTKFTQEQKAKMLDFAEKAGWKIQKLDESMVNKFCQDLGIKRRVLKTIASPPLQCAAHVTTLPSHRQLICVTRIHAARLSHPRRSRLAYPRPSPHLHHRNLHLVNPLRSAGALRNQFPSPQGALC 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g01760 259 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 34 83 IPR006456 -
Adu09g01760 259 Pfam ZF-HD protein dimerisation region 32 84 IPR006456 -
Adu09g01760 259 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 131 181 IPR006455 -
Adu09g01760 259 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 4 20 180 - -
Adu09g01760 259 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 20 180 - -
Adu09g01760 259 SUPERFAMILY Homeodomain-like 128 180 IPR009057 -
Adu09g01760 259 Gene3D - 116 183 - -
Adu09g01760 259 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 33 84 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g01760 Adu-Chr9 85513447 85516875 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g01760 18 181 ZF-HD Transcription Factor Family AT1G14440 47.179 1.07e-55 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Adu09g01760 ZF-HD_dimer 8.4e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g01760 - - adu:107466050 365.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g01760 09 85513447 85516875 Adu09g01760 09 85513447 85516875 ECH