Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g01717 ATGGAGGTGTCTTTGAGCGAGGCGGATGCTGATTGTGGAGGGAGTGATGGTGATGCTAACGAAGTAGAAAATTCTGATTTGGAAGACCTCGCTGGACTAAGTGTGGATGACATCCTCAAGAAGGTATGGGACAGCATTGAAAATGCATATGAGTTCTATCGGGGTTTCGGAAAATTGCATGGATTCGAGGTGCGAAAGGGTGACTCCGGAAAAGACTGTGACGGGAATGTTGTAAGGTGCAGGTTTTTTTGTAACAAGGAAGGGTTGAGGGAGCGTAAACACTACGACAGGGTTGACCGAACAAGGGTACACAAACCGGAAACAAGAACCAACTGCAAGGCAATGTTATCGGTTTATTTTGACAAAAATGATAAGCATTGGAAGGTTAGGAAAAGATGGTTGTACGCGGACATGGCAACAGATGTATTCGAGTCGGAATGGGAGCAAGTTGCCGAGGACTATGGACTCGGCCAGAAGCAGTGGTGGTGCCAGATGTATGAGAAAAAGGAGATGTGGGCAAGTAGCTATCTTCGTGACAAGTTCTGCGCGGGGTACCGGACCACATCCCGCTGTGAAGGAATTAACGCATATGTAAACAAGTTTTCCAAGTCCACCCACACAATTTTTGAGCTGGTGCAATGCTTAGAGATGGTTGCCCGTGAATATCGGAATAAGGAAATGCTGCTCCAGTTTCAATCCATAAACTCGGTTCCGGTCATGACAACATGCCTGAGAAGTCTTGAACGACATGCCGCTTCGGTGTACACCAGAGAAGTTTATGGTGATGTAAAGAAGGAGATCGAAGGGGTTGGTGCCTTGATCCTGATTAGCAGAAGGAGGATCATGAATTCCATGATATACACGCTAGAGGAGTACGAAGAACCTGATGTCCACATAATGTCATCATTTGGACGGTCAACTGGGAAGTTAAGTTGCCAGTGTAATTTCTGGAAGAAGCATGGTTATCCATGCAAGCACATGTTTTTCGTCATGAAGGCAGAGCACTCAAAGGAGATTCCCGACAATATAGTTCTGCGTAGGTGGAGAACTGATGCAAAGTCCGCTGAGCAGTACACAGAAAATTGGGGGGACTATAGTGAGCGTGGTGTCATCCTTCGTCACGGGGCTCTCCATTCCGCCTCGCAATGGCTGTTTTTCCTAGGGGCACAAAGGTTGTCCATTTTCCAGAAGACTATGCGTGGAATTGAAAGTTTATGTAAAGAGCTGGAGATGGACTGTAGGGCATTCGGTTCTAGCATGCACCGGACCGAAGAGAACGTTCGTGAAGCCAATCCGGTTGTAAGAGATCCAGTTATTTCTAAGACAAAGGGTGCCCCGAAAATTCCAAAGAAGAAGGCCCTTGGTAAAAGGAGGCGTTGCACCGGCTGCAAGGGCTTGGGACACACAAAGAGAAACTGCCCAAACAGGGGTGCCGGTAGACAAAATCCTGATCAGGCCGAGGAATGTGGGGGAATTAATGCCACCTGCGTAATCTTCAACGATGACTGGGAGTCTATCGTCGATGATAATCTATGTGCTGAACCCAGGGGCAAACTCAATGCGGACTAG 1569 0.4755 MEVSLSEADADCGGSDGDANEVENSDLEDLAGLSVDDILKKVWDSIENAYEFYRGFGKLHGFEVRKGDSGKDCDGNVVRCRFFCNKEGLRERKHYDRVDRTRVHKPETRTNCKAMLSVYFDKNDKHWKVRKRWLYADMATDVFESEWEQVAEDYGLGQKQWWCQMYEKKEMWASSYLRDKFCAGYRTTSRCEGINAYVNKFSKSTHTIFELVQCLEMVAREYRNKEMLLQFQSINSVPVMTTCLRSLERHAASVYTREVYGDVKKEIEGVGALILISRRRIMNSMIYTLEEYEEPDVHIMSSFGRSTGKLSCQCNFWKKHGYPCKHMFFVMKAEHSKEIPDNIVLRRWRTDAKSAEQYTENWGDYSERGVILRHGALHSASQWLFFLGAQRLSIFQKTMRGIESLCKELEMDCRAFGSSMHRTEENVREANPVVRDPVISKTKGAPKIPKKKALGKRRRCTGCKGLGHTKRNCPNRGAGRQNPDQAEECGGINATCVIFNDDWESIVDDNLCAEPRGKLNAD 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g01717 522 Pfam SWIM zinc finger 309 327 IPR007527 GO:0008270
Adu09g01717 522 ProSiteProfiles Zinc finger SWIM-type profile. 297 335 IPR007527 GO:0008270
Adu09g01717 522 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 41 130 IPR031052 GO:0006355
Adu09g01717 522 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 134 363 IPR031052 GO:0006355
Adu09g01717 522 SUPERFAMILY Retrovirus zinc finger-like domains 450 481 IPR036875 GO:0003676|GO:0008270
Adu09g01717 522 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 41 130 - -
Adu09g01717 522 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 134 363 - -
Adu09g01717 522 MobiDBLite consensus disorder prediction 1 23 - -
Adu09g01717 522 Pfam FAR1 DNA-binding domain 51 131 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g01717 Adu-Chr9 82341285 82343660 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu09g01717 FAR1 2e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g01717 - - ahf:112769548 694.886