Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g01561 ATGTTTGATGGAGTGCCAGGAGACCAGTTCCATCAATTCATAACACCAACAAGAACAACAACAACAACCACCTCATCACAAATCCCTCTTCATCATCATTTACCTTTCCCTCTCCCTCTCCATCATCCTTCTTCTAATCCCACATCATCAAACCCCAACAACAACACTAACANNNNNNNNNNNNNNNNNNNNNNNNNNNATCCTACACCTTTTGATCCTTATCATCATCATCACCACCAATTGCAGCTTCACCAAGTTCATCATCAACACCCCAGTATCTTGCACCCATCATTACACCTTCACCAACACCACAACAACAATAACAAACATCATCATCATGATGAAGACCGGGAAGAAAACAACGCTAGCAGTACTTCCACTACTACTGTGCCAATGAATTTTGAAATTGAAAGAGATCATGAGAGGCAGCAAATGCCTCCTCCTCAGCTCATTGATCCTTGGAGTAATGATGAAGTACTTGCTCTCTTGAGGATCAGATCTACCATGGAGAGTTGGTTCCCACAACTCACTTGGGAACATGTCTCAAGGAAGATGGCAGAGCTTGGATATAAGAGGAGTGCTGAGAAGTGCAAAGAGAAGTTTGAAGAAGAAAGCAGATATTTCAGCAGCAACATTAACTTCACCAACAAAACCATTACTCCTCCTCCTACTACTACTACTGGTTACCGCTTTCTTAGTGAACTTGAAGAGCTTTATCATCAACAAGATAATAGTGATCATCATCATCAACAAGAAGTGGTGGTAGTGGAGAAGCAACCAAGTAGTACTGACGGGCAAGAAGACAAGGTAGTCATGGACCAAGCATTGGGAGAAGAAGATGATAAGGAGAATGATGAAGAGGTGGTTGCTGGGGCGGCCGTGGTGGTGTTGCCGGAGAAGATTATTACGACAAAAACAAAGGAGAGGAAGAGGAAGAGGGGTGGTGGAGATGGCGACGGCAACGGCGACGGCGTTAGGTTTGAGATGTTCAAAGGTTTTTGTGAAAGCATTGTGCACAAGATGATGGAGCAACAAGAAGAGATGCACAACAAGTTAATAGAAGATATGGTGAGAAGAGATGAAGAGAAGCTTGCAAGAGAAGAGGCATGGAAGAAGCAAGAGGTGGAGAGAATGAACAAGGAGCTTGAGATCATGCAACAGGAACAAGCCATTGCTGGTGATAGACAAGCAAACATCATTGAGTTCTTGAAGAAATTTGCCCCAGAAATTCAAACCCTTGTTTGTGTTGAAGAAGATCATGATGATCACAATAATAATGGAAGAAACAAATTAGTGAAGGTAACAAATAATAATAACAATGTTGAACACAATGGTTCAAATTTGTTGTTGCATTCCCAAAACCCTAATCCTCCATCATCACCTTCTTCTTCTTCTGCTGTGATTGTGAATAACCAAAATGGTGTTGTTGTTGCTGCTGCTTCTTCTTCAACAAACCCTAGCTCAAGTCCTATTATACAAGCTGGCAAGAACCCTAATAGTACTTATCTCAACAATGATAGCCCAATAGTAGAGGCGGACTCGGCGGCAAAGAAGGCGGCTGCCACGACTGCGAACTGCGAGAAAGATGAAATTGGAAGAAGATGGCCAAAAGATGAAGTGTTGGCACTGATAAACCTGAGGTGCAACACGCAAGTGAGCAGCAACAATGATGAAAATGGGAGAGAAACTCACAAGGCTCTTCCATTGTGGGAGAGAATCTCACAAGGGATGGTTGAATTGGGGTACACAAGGAGTGCAAAGAGATGCAAAGAGAAATGGGAGAACATAAACAAGTACTTCAGAAAAACCAAAGATGCTAACAAGAAGAGGTCCCTTGATTCAAGAACTTGTCCCTATTTTCATCTTCTCAGTAGCCTCTATAGCCAAGGGAAGCTTCTTCTCCAACCTGAGAAGCAAGAAACTACTACTAATAATAATGATAACCATGGAAAAAAAATGGTCGGAGATCATCAAACTTCTTCACAAATGGGGTCTGCTATTGCTGCTGATGATAATCATGATCATGGAGGTGAGAATAACAATAATAATAAAGCTTTGATGCAAGCACCTTCTTTGGATTTTGATCAGTTTTAA 2094 0.414 MFDGVPGDQFHQFITPTRTTTTTTSSQIPLHHHLPFPLPLHHPSSNPTSSNPNNNTNXXXXXXXXXXPTPFDPYHHHHHQLQLHQVHHQHPSILHPSLHLHQHHNNNNKHHHHDEDREENNASSTSTTTVPMNFEIERDHERQQMPPPQLIDPWSNDEVLALLRIRSTMESWFPQLTWEHVSRKMAELGYKRSAEKCKEKFEEESRYFSSNINFTNKTITPPPTTTTGYRFLSELEELYHQQDNSDHHHQQEVVVVEKQPSSTDGQEDKVVMDQALGEEDDKENDEEVVAGAAVVVLPEKIITTKTKERKRKRGGGDGDGNGDGVRFEMFKGFCESIVHKMMEQQEEMHNKLIEDMVRRDEEKLAREEAWKKQEVERMNKELEIMQQEQAIAGDRQANIIEFLKKFAPEIQTLVCVEEDHDDHNNNGRNKLVKVTNNNNNVEHNGSNLLLHSQNPNPPSSPSSSSAVIVNNQNGVVVAAASSSTNPSSSPIIQAGKNPNSTYLNNDSPIVEADSAAKKAAATTANCEKDEIGRRWPKDEVLALINLRCNTQVSSNNDENGRETHKALPLWERISQGMVELGYTRSAKRCKEKWENINKYFRKTKDANKKRSLDSRTCPYFHLLSSLYSQGKLLLQPEKQETTTNNNDNHGKKMVGDHQTSSQMGSAIAADDNHDHGGENNNNNKALMQAPSLDFDQF 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g01561 697 SMART sant 531 599 IPR001005 -
Adu09g01561 697 SMART sant 150 207 IPR001005 -
Adu09g01561 697 MobiDBLite consensus disorder prediction 420 467 - -
Adu09g01561 697 ProSiteProfiles Myb-like domain profile. 153 205 IPR001005 -
Adu09g01561 697 PANTHER TRIHELIX TRANSCRIPTION FACTOR GTL2 36 680 - -
Adu09g01561 697 Gene3D - 535 602 - -
Adu09g01561 697 Gene3D - 154 209 - -
Adu09g01561 697 CDD GT1 533 604 - -
Adu09g01561 697 MobiDBLite consensus disorder prediction 429 467 - -
Adu09g01561 697 Pfam Myb/SANT-like DNA-binding domain 152 209 IPR044822 -
Adu09g01561 697 Pfam Myb/SANT-like DNA-binding domain 533 625 IPR044822 -
Adu09g01561 697 MobiDBLite consensus disorder prediction 1 127 - -
Adu09g01561 697 ProSiteProfiles Myb-like domain profile. 534 597 IPR001005 -
Adu09g01561 697 MobiDBLite consensus disorder prediction 12 30 - -
Adu09g01561 697 MobiDBLite consensus disorder prediction 488 507 - -
Adu09g01561 697 MobiDBLite consensus disorder prediction 634 697 - -
Adu09g01561 697 MobiDBLite consensus disorder prediction 43 60 - -
Adu09g01561 697 PANTHER - 36 680 - -
Adu09g01561 697 Coils Coil 368 388 - -
Adu09g01561 697 MobiDBLite consensus disorder prediction 634 667 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g01561 Adu-Chr9 61132593 61135866 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g01561 153 629 Trihelix Transcription Factor Family AT5G28300 43.615 5.07e-96 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Adu09g01561 Myb_DNA-bind_4 1.7e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g01561 - - ahf:112775947 976.467