Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g01556 ATGGTTACAACTGGTGGTACTAGCCTGAAAGATGATATCTTACGCTTATATCAACCAGTTTATTTACTAGTTGGGACTCCTGGAAGGATATGGGATCTCGCTAAAAAGGGTGTTTGCGTTCTGAAAGATTCCGCAATGCTTGTTATGGATGAGCAACATTTCCTTTTACTGGGAATAGACATTCAAGCAGTCAATGTTGTTATTAATTTTGATTTTTCCAAGAATTCAGAAACTTATCTCCACAGGGTCGGTTGCTCAGGGAGGTTTGGGAATCTTGGTTTAGCAGTTAACTTGATTACTTATGAGCAAGCTTCTAGGAAGTACTCAAGAATGGCATCTGAAACCATAAAAGAAAAAAAGATCTCAGAACTTATAATAGTTGTGAGGATTAGGGTCCAAAAATGA 405 0.3778 MVTTGGTSLKDDILRLYQPVYLLVGTPGRIWDLAKKGVCVLKDSAMLVMDEQHFLLLGIDIQAVNVVINFDFSKNSETYLHRVGCSGRFGNLGLAVNLITYEQASRKYSRMASETIKEKKISELIIVVRIRVQK 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g01556 134 Pfam Helicase conserved C-terminal domain 57 90 IPR001650 -
Adu09g01556 134 Gene3D - 45 127 IPR027417 -
Adu09g01556 134 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 102 IPR027417 -
Adu09g01556 134 Pfam DEAD/DEAH box helicase 3 56 IPR011545 GO:0003676|GO:0005524
Adu09g01556 134 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 1 56 - -
Adu09g01556 134 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 57 122 - -
Adu09g01556 134 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 6 57 122 - -
Adu09g01556 134 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 6 1 56 - -
Adu09g01556 134 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1 132 IPR001650 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g01556 54 102 Eukaryotic Initiation Factors Gene Family AT1G72730 55.102 5.09e-13 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g01556 K12614 - pda:103698464 149.058