Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g01555 ATGTTGACTTCTGATGATCTTGCTTCCTCTGTTGTTGGAACTCCTAGCTACATGTGCCCCGAGCTCCTAGCTGATATACCTTATGGTTCCAAATCGGATATTTGGTCCCTGGGATGTTGTATATATGAAATGACATCACTCAAGCCTGCATTTAAAGCATTTGATATACAAGCATTGATTAACAAGATTAATAGGTCCATAGTGGCTCCATTACCAACGAAATATTCTGGTTCATTTCGAAGTCTTGTTAAAAGCATGCTGCGGAAAAATCCAGAGCTTAGGCCCAGTGCTGCAGAGCTGCTTGGGCACCCACATCTTCAACCATATGTTCTTAAGATTCATCTCAAAATTAATAGCCCCAGGCAAAATTCATTACCAGTCCAATGGCCAGAATCCAAGTACATGAAGAAAACCAGATTCTTGGAGCGGAAAGATGAACATGTTTCTATCTATAGGGATAAAAGGCGTTCTTTTAGCAATGATCGGACTCTAAACCCTAGTGTTTCTGGAGCTGATCAAGATTCTGTATGTTCCACCCTAGAAATAGATTGTACTCCTGATGATTTAAATCAGAGGTTAGCAGAGTTGAGTGTCAGAGGTAGCCATGGAATGAAGTCAATCCATAAGCCTGTTCTCTCCAGAACTTCTAGTATGGCTAAGATTCCCAGGATCAGTCATGCAAAACTTTCTTCTACCAACAAGAAATTAATGGAACCCACAAAGGATCTTAAGGCAGGAAGGCAATCTCTTCCTGCTTCAAACAATTCCACAAAATCTACCCAAACAAATCGCAGAGCATCCTTTCCACTGCCATCAAAGGGTACTCAGAAGCCTCCTCACAGGCCTAGTAGTATTGGTTTGCTTAGCCATGTATCTTCACCAGATATTTCAGTCAACTCTCCCCGAATTGATAAGATAGCTGAATTCCCATTAGCATCATATGAAGATCCACTGTTCCGATTCAACAGATCATCAACTGTGATTGACAAATGCACAATAGATGTATATGATAAAGCCTCTGTTAGGGCTTGTAATGCTGATACTTGGCAAGGAATCAAGCGCAGCATGTTGAAGGAAAACGACGAGGACAAAAAAAGTGGTTCATCTGATCAAAATGCAACAGCAGGTGCATCGAGTCACACCTCTTCGGATCTGCGCCGCCGACAGTTTGATACTTCATCGTACCAACAGAGGGCCGAAGCCTTGGAAGGGCTGCTTGAATTCAGTGCAAGATTGCTGCAGCAGGCAAGGTATGATGAACTCGGGGTTTTGTTGAAACCATTTGGGCCTGAGAAGGTTTCCCCAAGGGAAACTGCAATCTGGTTGAGTAAGAGCTTCAAAGAGAACACATTCAACCCTGAAGAATCCCCGTAA 1374 0.4279 MLTSDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDIQALINKINRSIVAPLPTKYSGSFRSLVKSMLRKNPELRPSAAELLGHPHLQPYVLKIHLKINSPRQNSLPVQWPESKYMKKTRFLERKDEHVSIYRDKRRSFSNDRTLNPSVSGADQDSVCSTLEIDCTPDDLNQRLAELSVRGSHGMKSIHKPVLSRTSSMAKIPRISHAKLSSTNKKLMEPTKDLKAGRQSLPASNNSTKSTQTNRRASFPLPSKGTQKPPHRPSSIGLLSHVSSPDISVNSPRIDKIAEFPLASYEDPLFRFNRSSTVIDKCTIDVYDKASVRACNADTWQGIKRSMLKENDEDKKSGSSDQNATAGASSHTSSDLRRRQFDTSSYQQRAEALEGLLEFSARLLQQARYDELGVLLKPFGPEKVSPRETAIWLSKSFKENTFNPEESP 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g01555 457 MobiDBLite consensus disorder prediction 357 390 - -
Adu09g01555 457 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 442 - -
Adu09g01555 457 PANTHER SERINE/THREONINE-KINASE NEK4 1 442 - -
Adu09g01555 457 SMART serkin_6 1 106 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu09g01555 457 MobiDBLite consensus disorder prediction 369 383 - -
Adu09g01555 457 ProSiteProfiles Protein kinase domain profile. 1 106 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu09g01555 457 SUPERFAMILY Protein kinase-like (PK-like) 5 148 IPR011009 -
Adu09g01555 457 MobiDBLite consensus disorder prediction 247 270 - -
Adu09g01555 457 MobiDBLite consensus disorder prediction 200 296 - -
Adu09g01555 457 Gene3D Transferase(Phosphotransferase) domain 1 1 170 - -
Adu09g01555 457 Pfam Protein kinase domain 8 105 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g01555 Adu-Chr9 60578715 60582893 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g01555 10 107 MAP Kinase Kinase Kinase AT1G53570 39.000 1.69e-14 73.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Adu09g01555 Pkinase 2.4e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g01555 K08857 - gmx:100804898 708.753