Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g01522 ATGCTTTTGGCGTACTCGTCCCTTGCTCCTTCTTTCTCCCCGGTCGTGCCAAAGATCCGAGTTGCCATTTCCACCGCTGCAATCCCAACCTTCCGATTAAGTATTGACCTGATCAAGGGGACGATTGGATTCCTTCCTATCGTTAAAACAACTGCATTAGAGATGGAGGGAAAAACCGAGGATGAGGTGGTAGATATTGAGAGTGGTTCTAGTGGTTCTTTCAATGATGATTCTGATGATGAGGGATCTTTGCCTCCTGAAGTTGATGATGATAGAGTAAATCTTGAGGAACCTTTGACTGAGGAGGAGATACAAGACCTTATTTCTGAGTTGTTAGAAGTAGAGAGCAAGGCTGCAGAGGCCCAAGAAGCTCTTGAAGAGGAGTCTCTTGCCAAAGTGGAGAGTGATGTTAGACAAGAATTGCAGCAAACTCTGACAGAGGATGATTTGGAAACTGCTGTTGCTGATGAGATGGCTACTTTTAAAGAAGAGTGGGAAACTGTGCTGGACGACCTTGAAACTGAAAGTGCCAACTTGCTGGAACAACTCGACGGTGCTGGAATTGAGCTCCCAAGCCTTTATAAGTGGATTGAAAAGGAAGCTCCCAATGGTTGCCGCACTGAAGCATGGAAAAAGAGGAATCATTGGGTAGGGTTGCAGGCAACTACGGAAATTGCTGAATCAGTTGCTGATGCTGAGAAGTATCTACAAGTAAACAGACCTGTTAGAAGGCGACATGGTAAACTACTTGAAGAGGGAGCTAGTGGATTTCTCCAAAAAAAAATTGGTGATGAAACCAAGGATCCTGTAAAGAAAGGAATGGAGGGAGATTGGGATTTGTTCAATAAAATAGTGTCTGATGGGAGTGGCACTGATGTTTCATTTGGCAGTAAGCACTGGGCTTCTGTTTATTTGGCCAGCACCCCACAGCAAGCTGCACTGATGGGACTCAAATTTCCTGGAGTTAATGAGGTAGAGGAGATTGACGATGTTGATGGCAATTCGGCTGATCCATTTGTTGCAGCTGCGATAGCAAATGAAAGAGAACTAGATCTTTCTGAGGAGCAAAAGAGACAATTTAAGAAGGTCAAAGAAGAGGATGATGCTATTGTTGATAGGAAGCTTCAAATCCATTTGAAACAAAGGAGGCGTCGGAAGAAAAGTAAACAGTGCTATTTATTTGTCATCTTTTTCGTTCCCTTCTTCTGTAACCATAAACCTATTATTCGTCCCACGGAAGTAACTTGTGTTGATGGGAAAATTATTTCTGATGACAAGAATTCTTTTCTGAATTTGCAGAACGATAAACTTGAAGATTTTGATGCTGGTTACGATCTTGAAAAGGATAATGCTATGAGTACTGGTGACTTGGCTGATCCACCCAAATCTTTGTTGGATGATATTATTGAACAGCGGGGAACTAAGCGTTTGAATGATGGTGAGCTCGACACTGATAATAAAAAGTCTCGTACTATTAGTGATGACAGTGACGATGACACAGATGCCATTGAAGACAAGGTAGATAGGAATATGAGTACTCTAGAGGAAAAAGGCTTATTAAACAGTGGTGCTGATACTCTTCCTTCAGTGTGTCCAAATGAGAAATTTCACTGCACAATTTGTCATCAAGTGGCTCTTGAAGTTCACTCACACCCTCTGTTGAAGGTGATTATTTGTGGAGATTGCAATTGCTTAATGGAGGAAAAGATATGCCGAAAGGACCTGAGTCTTGATTCTCCCTCAAGTCATTGTGCATGGTGTGGAGGAAGCAGTGGATTAATTAATTGTAAATCATGCACAATGTTATTCTGCACCAACTGCATAAAGAAGAATCTTGGTGCAGAATCTCTTACTAAAGCTCAGGCCACTGGCTGGGATTGTTGTTTTTGCCAGCCAAATAGTCTGCAAAGACTGACACTGCTATTGGAGAAAGCTATGGGATCTACTGCTGAACTAGTTTCCAGCTCTAGCAGTGATTCAGAAAATTCAGATGATTCAGATGATTCGGATGAGTCTGATGCAGAGATTAATGCTACAATCAGCTCTAAGAGAAGGCGCAAAAAGAAGATTCGAAGGATACTCGATGATACGGAATTAGGTGAAGAAACAAAAAAGAAAATAGCAATTGAAAAGGAACGTCAGGAACGCTTGAAGTCTTTGCGAGGCCAGTTCTCTGCTTCACCAAATGAAATGAGCTCATCAAATTTATCCGAAGGGGCTAGTGTTGAAGTTCTTGGCGATGCGGCATCAGGTTACATAGTGAATGTTGTGAGGGAGAAAGGTGAAGAAGCTGTCAGAATTCCTCCGAGCATCTCAGCCAAACTCAAAGCCCACCAGATTGCAGGAATAAGATTTATGTGGGAAAATATAGTAGAGTCAATAAGAAAAGTGAAGTCTGGGGATAAAGGTCTTGGCTGTATTCTAGCTCATACCATGGGCCTTGGTAAAACTTTTCAGGTGATTGCTTTCTTGTACACTGCAATGAGGTGTGTTGATTTGGGGTTAAGGACCGCACTTATAGTCACACCTGTCAATGTTCTGCATAATTGGCGGCAGGAGTTTATTAAGTGGAAGCCCTCAGAGTTAAAGCAACTCAGAGTCTTCATGCTGGAAGATGTACCAAGAGATAGGAGGGTTGAGCTGCTTGCAAAGTGGAGAACCAAAGGTGGTGTCTTTTTGATTGGTTATACTGCTTTCCGTAATTTATCTTTTGGGAAGCATGTGAAAGACCGGAATGTGGCCAGAGAGATTTGCCATGCTTTGCAGGATGGACCGGACATTCTTGTTTGTGATGAAGCCCATATGATTAAAAATACAAGGGCTGATGTAACTCATGCCTTGAAACAAGTAAAATGCCAAAGAAGAATTGCCCTGACTGGATCGCCCCTTCAAAACAATCTCATGGAATACTATTGTATGGTTGATTTTGTAAGAGAAGGTTTTCTTGGAAGCAGCCATGAATTTAGAAACCGGCAAGGCTTTCTTTACTCTCACTTCTCTGATTTTTGCTGCGACTTCCAGAATCCTATAGAGAATGGTCAACACACTAATTCGACTCTCACAGATGTGAAAATTATGAACCAAAGATCACATATTCTCTATGAACAGTTAAAAGGCTTTGTCCAAAGAATGGACATGACTGTGGTGAAAAAGGATCTACCCCCCAAAACTGTCTTCGTGGTAACCGTCAAGCTTTCTTTGTTACAAAGAAAACTGTACAAGAGATTCCTTGATGTGCATGGGTTCAGTAAAGACAGCGCTCATGAAAAGTTTGGAAAAAGATGTTTTTTTGCTGGTTACCAGGCGTTAGCCCGGATATGGAACCACCCTGGGATCTTGCAATTAACAAAAGAAGACAAGGACTATGTAAGACAAGAAGAAGCTGTTGAGAATTTTATCGTGGATGACTGCAGCAGTGATGATAATTCTGATATTAATGCTGTTGGAGGTAAGAAGATGAGGTATGCAAATGATTTGCCGCAAAAGAAAGATGGTACTGGCTTTTTCGTAAAGGGTTGGTGGCATGATCTACTTCCTGGAAAGATTTATAGAGAGCCTGATCATGGTGGCAAAATGGTTTTGCTACTAGAGATATTAACCATAAGTTCTAGTGTGGGCGATAAGGTATTAGTTTTTAGTCAGAGCATACCAACGCTAGACCTCATAGAACTTTATCTCTCAAAGATACCTCGACATGGCAAACCTGGGAAGCGTTGGAAGAAGGGGAAAGATTGGTATCGGCTGGATGGAAGGACAGAGAGCTCTGAAAGGCAGAGGATTGTTGAGAGATTTAATGAGCCCTCAAATAAGAGGGTAAAATGCACTCTGATTTCAACCAGAGCAGGTTCTTTGGGTATTAACCTTCATTCTGCTAACCGTGTTGTTATAATTGATGGTTCTTGGAATCCAACATACGATCTGCAGGCCATCTATCGTGCTTGGAGGTATGGGCAGACAAAACCTGTATTTGCATACCGATTGCTGGCTCATGGCACCATGGAAGAGAAAATATATAAGCGCCAGGTAACAAAGGAGGGGCTTGCCGCTAGAGTGGTTGATAGGCAACAGGTGCATAGGACCATATCTAAAGAAGAGATGTTACATCTGTTTGAGTTTGGTGATGATGAGAACCCTGAGACTTTGGCTGAACTTAATCAAGAAAATGGCAGCAGTAGTAATACAGTTAAACATACAACACCACATTCAAATGGAAGTAGCAACTCTGATAAGCTAATGGAAAGCTTACTTAAAAATCATCAACCCCGTTGGATTGCCAATTATCATGAACATGAAACCCTGTTACAAGAAAATGAAGAGGAGAAGCTATCAAAAGAGGAGAAAGACATGGCTTGGGAGGTGTACAAGAAATCACTTGAATGGGAAGAAGTGGGGAGGGTACCAATTAGTGACCCCATGCCTGATCAAAAGGCAGAGATGGCTGCAAGTTCAAAACTACAACAGGTGAAAGACCCTCTTAGCATGGTGTCAAGTAGTAGAATAAGGAATCGTTTTAACATGAGAAAGTGCACAAACCTTGCACACATGCTCACACTCAGAAGTCAGAGAATAAAACAAGGTGGCTGTACAGTTTGTGGGGAATGTGCTCAGGAGATCAGGTGGGATGACTTGAAGATTACTAAATAG 4644 0.4199 MLLAYSSLAPSFSPVVPKIRVAISTAAIPTFRLSIDLIKGTIGFLPIVKTTALEMEGKTEDEVVDIESGSSGSFNDDSDDEGSLPPEVDDDRVNLEEPLTEEEIQDLISELLEVESKAAEAQEALEEESLAKVESDVRQELQQTLTEDDLETAVADEMATFKEEWETVLDDLETESANLLEQLDGAGIELPSLYKWIEKEAPNGCRTEAWKKRNHWVGLQATTEIAESVADAEKYLQVNRPVRRRHGKLLEEGASGFLQKKIGDETKDPVKKGMEGDWDLFNKIVSDGSGTDVSFGSKHWASVYLASTPQQAALMGLKFPGVNEVEEIDDVDGNSADPFVAAAIANERELDLSEEQKRQFKKVKEEDDAIVDRKLQIHLKQRRRRKKSKQCYLFVIFFVPFFCNHKPIIRPTEVTCVDGKIISDDKNSFLNLQNDKLEDFDAGYDLEKDNAMSTGDLADPPKSLLDDIIEQRGTKRLNDGELDTDNKKSRTISDDSDDDTDAIEDKVDRNMSTLEEKGLLNSGADTLPSVCPNEKFHCTICHQVALEVHSHPLLKVIICGDCNCLMEEKICRKDLSLDSPSSHCAWCGGSSGLINCKSCTMLFCTNCIKKNLGAESLTKAQATGWDCCFCQPNSLQRLTLLLEKAMGSTAELVSSSSSDSENSDDSDDSDESDAEINATISSKRRRKKKIRRILDDTELGEETKKKIAIEKERQERLKSLRGQFSASPNEMSSSNLSEGASVEVLGDAASGYIVNVVREKGEEAVRIPPSISAKLKAHQIAGIRFMWENIVESIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRCVDLGLRTALIVTPVNVLHNWRQEFIKWKPSELKQLRVFMLEDVPRDRRVELLAKWRTKGGVFLIGYTAFRNLSFGKHVKDRNVAREICHALQDGPDILVCDEAHMIKNTRADVTHALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRQGFLYSHFSDFCCDFQNPIENGQHTNSTLTDVKIMNQRSHILYEQLKGFVQRMDMTVVKKDLPPKTVFVVTVKLSLLQRKLYKRFLDVHGFSKDSAHEKFGKRCFFAGYQALARIWNHPGILQLTKEDKDYVRQEEAVENFIVDDCSSDDNSDINAVGGKKMRYANDLPQKKDGTGFFVKGWWHDLLPGKIYREPDHGGKMVLLLEILTISSSVGDKVLVFSQSIPTLDLIELYLSKIPRHGKPGKRWKKGKDWYRLDGRTESSERQRIVERFNEPSNKRVKCTLISTRAGSLGINLHSANRVVIIDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLLAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPETLAELNQENGSSSNTVKHTTPHSNGSSNSDKLMESLLKNHQPRWIANYHEHETLLQENEEEKLSKEEKDMAWEVYKKSLEWEEVGRVPISDPMPDQKAEMAASSKLQQVKDPLSMVSSSRIRNRFNMRKCTNLAHMLTLRSQRIKQGGCTVCGECAQEIRWDDLKITK 1547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g01522 1547 Gene3D - 747 1043 IPR038718 -
Adu09g01522 1547 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1049 1385 IPR027417 -
Adu09g01522 1547 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 761 1043 IPR027417 -
Adu09g01522 1547 CDD SF2_C_SNF 1178 1328 - -
Adu09g01522 1547 Coils Coil 162 189 - -
Adu09g01522 1547 Pfam SNF2-related domain 798 1112 IPR000330 GO:0005524|GO:0140658
Adu09g01522 1547 ProSiteProfiles ADD domain profile. 526 658 IPR025766 -
Adu09g01522 1547 MobiDBLite consensus disorder prediction 652 680 - -
Adu09g01522 1547 MobiDBLite consensus disorder prediction 476 496 - -
Adu09g01522 1547 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1194 1365 IPR001650 -
Adu09g01522 1547 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 797 980 IPR014001 -
Adu09g01522 1547 Coils Coil 346 366 - -
Adu09g01522 1547 MobiDBLite consensus disorder prediction 66 91 - -
Adu09g01522 1547 CDD ADDz_ATRX 534 632 - -
Adu09g01522 1547 MobiDBLite consensus disorder prediction 1384 1409 - -
Adu09g01522 1547 PANTHER RAD54-LIKE 81 1543 - -
Adu09g01522 1547 PANTHER RAD54-LIKE 81 1543 IPR044574 GO:0016887
Adu09g01522 1547 SMART ultradead3 771 991 IPR014001 -
Adu09g01522 1547 MobiDBLite consensus disorder prediction 476 502 - -
Adu09g01522 1547 Coils Coil 1427 1447 - -
Adu09g01522 1547 Pfam Helicase conserved C-terminal domain 1192 1317 IPR001650 -
Adu09g01522 1547 SMART helicmild6 1220 1317 IPR001650 -
Adu09g01522 1547 Coils Coil 104 131 - -
Adu09g01522 1547 Gene3D - 1054 1404 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g01522 Adu-Chr9 55776395 55798571 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g01522 805 1347 RAD5 or RAD16-like Gene Family AT1G02670 25.175 7.07e-23 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Adu09g01522 SNF2_N 2.3e-44 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g01522 K10779 - gmx:100794911 2178.29