Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g01512 ATGGCGCCTAATCGTAGAGTTACCAATGCCTATAATGCTATGAGAATCTTAGGCATTTCTGATGATGAGGTGATGCCTGTCTTGAAAAGGTTGCTCAAAGTGTATGGTAATAGCTGGGAGCTTATTGAAGAAGACAATTATCAAACACTTATACATGCATACTTTGAGTCAATGGAATATCAGCAAGAGAAAGGTAAGGGAAAAGCTCCAATCAGTAATCATGATGGAGAAAGAGCAAGACTGAAACTACAGATGATATCTGTAGTGGACAATGAAATACTTTCAAAGACATCCAAAAAGAAAATCATTAAGCCATCTCAGGCATCTAAAGAAGATATGAAACTGGCAAACAGTTCTCAACCATTGCAGACAAGGTTGAGTGAGGTAGAAATTATCTCAAGTTTATCTTGCATGGATGCTAGAGATAGTAAAAAATTGTGCCATGAGAATGCAGCATCTGCAAGGGATTGTGGAGATTCTTTTGATGGATCTAGCCGTTCCCACATCCAGAAGATACATATGTCAAGTAATCGTTATGAGAAAGAACTTATAATATTAAAAGCTAAGAAACCAAAATTACATCTTGAACCTGTTTCATCACATCTAAAAGGCCCTTGTGATGATTCAAATGTAAATCATCGTTTCAAATTTATATCAGCTCTTTATCAAAATGGGCCAAATCCCAATCATGCCAATTTGAGTAACATGGTACAACAAGCTATTGTCCATCCTGAATATAATTCTGCAGGCCCATGCGATGATTCAAACACAAATCGTCATTTCAAATCTATATCATCTCTTTATCAAAATGGGCCAAATCTCAATCATGCGAATTTGACAAACATGGTACAACAAGCTGTTGTTCATCCTGAACATAATTCTAGAGGCCCATGCGATGATTCAAATGTAAATTGTCGTTTCAAATCTATATCAACTCTTTATCAATATGGACCAAATCTCAATCATGCTAATTTGACAAAAATAGCACAAAAAGCTATTGTTCATGCTGAAAATAGTTCTATTCAAATTCTGAGTGACATAACAAAAGGTTCTGAAAAGGTTGCAATTTCATTATTAGATGAAACTGGAAGTGAGGAGTTGCCTAAGTTTAATTACATACCAAATAATATAATCTATCAAAATGCTAATGTGAACATTTCACTTGCTCGGGTTGCGGATGAGGATTGTTGTTCTGATTGTTCAGGCAACTGTCTTTCTTTAACATTTCCTTGTGCATGTTCTCAAGAAACTGGTGGGGAGTTTGCTTATACTCGAGAAGGTTTGGTGAAGGAAAAGTTCTTAGAAGCATGCATAGCTACAAAAATCAAACCTCAACCATATCATTTTGTGTATTGTCAAGAATGCCCAATTTATAAAGGGAGTGAGCACATGCCTGAAGAATGCAAGGGGCATTTGGTTAGAAAGTTTATAAAGGAATGTTGGAGGAAATGTGGATGTGATATGCAGTGTGGAAATCGGGTAGTGCAACGAGGTTTAAGATGTAAACTGCAGGTATTCTTGACTCAGGAAGGAAAGGGTTGGGGCATTAGAACACTAGAAGATTTGCCCAAAGGTTGCTTTGTATGTGAGTACGTCGGGGAAATATTAACCAATGCAGAATTGTATGAAAGGGTATTGCACAAAAGCAGCAAGGACAGACATACATATCCTGTAACCCTTGATGCAGATTGGGGCTCAGAAAGGGTGTTAAAGGATGATGAGGCACTCTGCTTAGATGCAACTTATAATGGAAATATTGCAAGGTTTATCAATCATAGATGCTTTGATGCAAATTTGATAGACATTCCTGTTGAAGTGGAGATTCCTGATCGCCACTATTATCATATTGCTCTCTTTACTAATAGGAAAGTGAAAGCATACAAAGAGCTGACATGGGATTATGGTATTGACTTTGATGATCAGGAACATCCTATTAAAGCATTTCAATGCTGCTGTGGAAGTACCTTCTGCCGTGACAAGAAAAAGAAAGGAACTGGCATGAAAGCTAAAAAACAAAGGTAG 2022 0.3709 MAPNRRVTNAYNAMRILGISDDEVMPVLKRLLKVYGNSWELIEEDNYQTLIHAYFESMEYQQEKGKGKAPISNHDGERARLKLQMISVVDNEILSKTSKKKIIKPSQASKEDMKLANSSQPLQTRLSEVEIISSLSCMDARDSKKLCHENAASARDCGDSFDGSSRSHIQKIHMSSNRYEKELIILKAKKPKLHLEPVSSHLKGPCDDSNVNHRFKFISALYQNGPNPNHANLSNMVQQAIVHPEYNSAGPCDDSNTNRHFKSISSLYQNGPNLNHANLTNMVQQAVVHPEHNSRGPCDDSNVNCRFKSISTLYQYGPNLNHANLTKIAQKAIVHAENSSIQILSDITKGSEKVAISLLDETGSEELPKFNYIPNNIIYQNANVNISLARVADEDCCSDCSGNCLSLTFPCACSQETGGEFAYTREGLVKEKFLEACIATKIKPQPYHFVYCQECPIYKGSEHMPEECKGHLVRKFIKECWRKCGCDMQCGNRVVQRGLRCKLQVFLTQEGKGWGIRTLEDLPKGCFVCEYVGEILTNAELYERVLHKSSKDRHTYPVTLDADWGSERVLKDDEALCLDATYNGNIARFINHRCFDANLIDIPVEVEIPDRHYYHIALFTNRKVKAYKELTWDYGIDFDDQEHPIKAFQCCCGSTFCRDKKKKGTGMKAKKQR 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g01512 673 Pfam SET domain 513 635 IPR001214 GO:0005515
Adu09g01512 673 Pfam Ubiquitin-binding WIYLD domain 4 59 IPR018848 GO:0018024
Adu09g01512 673 Gene3D - 1 59 IPR043017 -
Adu09g01512 673 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR2-LIKE PROTEIN 1 668 - -
Adu09g01512 673 Gene3D SET domain 322 647 IPR046341 -
Adu09g01512 673 CDD SET_SETDB-like 368 635 - -
Adu09g01512 673 SUPERFAMILY SET domain 356 658 IPR046341 -
Adu09g01512 673 Pfam Pre-SET motif 347 493 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Adu09g01512 673 SMART set_7 501 641 IPR001214 GO:0005515
Adu09g01512 673 ProSiteProfiles Pre-SET domain profile. 400 498 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Adu09g01512 673 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 673 IPR025776 -
Adu09g01512 673 ProSiteProfiles SET domain profile. 501 635 IPR001214 GO:0005515
Adu09g01512 673 SMART preset_2 344 485 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Adu09g01512 673 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 1 668 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g01512 Adu-Chr9 54266898 54278309 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g01512 477 658 C2H2 Transcription Factor Family AT2G23740 39.572 4.25e-29 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Adu09g01512 Pre-SET 2.1e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g01512 - - adu:107465821 902.123