Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g01437 ATGAAAGGAATATCCTATCGGGGTAATCATATTTGCTTCGGAAGATATGCTCTTCAGGCACTTGAACCCGCTTGGATCACATCTAGACAAATAGAAGCAGGTCGGCGGGCAATGTCACGAAATGTCCGCCGAGGTGGACAAATATGGGTACGGATATTTCCAGACAAACCAGTTACAGTAAGACCAACCGAAACGCGTATGGGTTCGGGAAAGGGATCTCCCGAATATTGGGTAGCTGTCGTTAAACCCGCCGATAACAGCGGAGCCCGCCAATTGATGTGTATTCGAATCATAGGAGCAGGTAATCGACGATATGCTTCTATTGGTGACATTGTTGTTGCTGTAATCAAGGAAGCGGTACCAAATATGTCTTTAGAAAGATCAGAAGTGATTAGAGCTGTAATTGTACGTACTTGTAAAGAACTTAAACGTAGCAATGGCATGATAATACAATATGATGATAATGCCGCGGTTGTCATTGATCAAGAGGGAAATCCAAAAGGAACTCGAATTTTTGGCGCAATCGCCCGGGAATTGAGACAGTTAAATTTCACTAAAATAGTTTCATTAGCACCTGAGGTTCGGGATACTCCCTTGTTCCACAGTCCGGGGCTATTTAAACTAACCAATTCAGAATTCTCCGATGTACTAGTATTAGCAATAGCAAGTGCATCTTTGATGCAGTCATCAATTCTCCCGAGAGGCTACAATTGCCACGAGCAAACATATTAA 732 0.4303 MKGISYRGNHICFGRYALQALEPAWITSRQIEAGRRAMSRNVRRGGQIWVRIFPDKPVTVRPTETRMGSGKGSPEYWVAVVKPADNSGARQLMCIRIIGAGNRRYASIGDIVVAVIKEAVPNMSLERSEVIRAVIVRTCKELKRSNGMIIQYDDNAAVVIDQEGNPKGTRIFGAIARELRQLNFTKIVSLAPEVRDTPLFHSPGLFKLTNSEFSDVLVLAIASASLMQSSILPRGYNCHEQTY 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g01437 243 Pfam Ribosomal protein L16p/L10e 2 83 IPR016180 GO:0003735|GO:0005840|GO:0006412
Adu09g01437 243 ProSitePatterns Ribosomal protein L16 signature 2. 66 77 IPR020798 GO:0003735|GO:0005840|GO:0006412
Adu09g01437 243 SMART Ribosomal_L14_2 79 195 IPR000218 GO:0003735|GO:0005840|GO:0006412
Adu09g01437 243 ProSitePatterns Ribosomal protein L14 signature. 133 159 IPR019972 -
Adu09g01437 243 PRINTS Ribosomal protein L16 signature 42 71 IPR000114 GO:0003735|GO:0006412|GO:0019843
Adu09g01437 243 PRINTS Ribosomal protein L16 signature 26 37 IPR000114 GO:0003735|GO:0006412|GO:0019843
Adu09g01437 243 PRINTS Ribosomal protein L16 signature 72 101 IPR000114 GO:0003735|GO:0006412|GO:0019843
Adu09g01437 243 PRINTS Ribosomal protein L16 signature 8 20 IPR000114 GO:0003735|GO:0006412|GO:0019843
Adu09g01437 243 Hamap 50S ribosomal protein L14 [rplN]. 60 195 IPR000218 GO:0003735|GO:0005840|GO:0006412
Adu09g01437 243 ProSitePatterns Ribosomal protein L16 signature 1. 43 54 IPR020798 GO:0003735|GO:0005840|GO:0006412
Adu09g01437 243 Gene3D Ribosomal protein L14 82 195 IPR036853 GO:0003735|GO:0005840|GO:0006412
Adu09g01437 243 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 82 194 IPR000218 GO:0003735|GO:0005840|GO:0006412
Adu09g01437 243 PANTHER RIBOSOMAL PROTEIN L14B/L23E-RELATED 82 194 - -
Adu09g01437 243 SUPERFAMILY Ribosomal protein L16p/L10e 1 83 IPR036920 GO:0003735|GO:0005840|GO:0006412
Adu09g01437 243 Pfam Ribosomal protein L14p/L23e 80 194 IPR000218 GO:0003735|GO:0005840|GO:0006412
Adu09g01437 243 Gene3D Ribosomal protein L10e/L16 1 81 IPR036920 GO:0003735|GO:0005840|GO:0006412
Adu09g01437 243 SUPERFAMILY Ribosomal protein L14 78 194 IPR036853 GO:0003735|GO:0005840|GO:0006412
Adu09g01437 243 CDD Ribosomal_L16_L10e 7 83 IPR016180 GO:0003735|GO:0005840|GO:0006412
Adu09g01437 243 TIGRFAM rplP_bact: ribosomal protein uL16 1 83 IPR000114 GO:0003735|GO:0006412|GO:0019843
Adu09g01437 243 TIGRFAM rplN_bact: ribosomal protein uL14 81 194 IPR005745 GO:0003735|GO:0006412|GO:0015934
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g01437 Adu-Chr9 41220423 41221775 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g01437 79 191 Cytoplasmic Ribosomal Protein Gene Family AT3G04400 36.752 2.16e-15 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g01437 K02874 - dct:114579343 308.916