Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g01413 ATGACATACATGTTCAAATACGACTATGTTCACGGTCAATGGAAGCACCACGAGTTGAAGGTCAAGGACGAGAATACCCTTCTCTTTGACGAGAAGCCAGTCACTATTTTTGGAATCAGGAACCCCGAGGAGATCCCATGGGGATCCGCCGGAGCTGACATCATCGTTGAGTCCACCGGGGTCTTCACTGACAAGGACAAGGCTGCTGCCCATTTAAAGGGAGGTGCTAAGAAGGTTATTATCTCTGCTCCCAGCAAAGATGCCCCCATGTTTGTTGTTGGTGTTAACGAACACGAATACAAGCCAGAGCTTGACATCATTTCTAATGCTAGCTGCACTACTAACTACCTTGCTCCACTTGCCAAGGTCATCAACGACAGGTTTGGCATCGTTGAGGGTCTCATGACCACTATCCACTCTATCACTGTGGAGCGAGGGAGGAACATAAACTATGTTCTTGAACAGTACGCAAAGTTTGTTAAGCCTGCCTTTGATGATTTTGTTCTACCGTCAAAGAAGTATGCTGATGTGACCGTTCCTCGGGGAGGTGATAATCATGTTGCCATTGATTTGATCGTGCAACATATCCGCACAAAGCTTGGTCAACATGATCTGTGCAAAATATATCCAAATGTTTATGTTATTCAATCAACATTTAGGCCATACAATTCTGATATTTCGGAAACTGGTGCATTCTCCCAAAATCCTGCACTTGTTCTTACCCCAGTTGTCCCAAGGTACGCCCTTGTTACTGTTGTACAAAGTTCTTTTGGAGAAGTGCTTTCTGCTATTTCTGTTATAAATAACAATGAGTATATTTGGTGGAAGGCTAATGCTAGAGAGACAAAAGAAGAACTAATTAATAGAGGGCCTATGTTCCTGGACTAG 888 0.4381 MTYMFKYDYVHGQWKHHELKVKDENTLLFDEKPVTIFGIRNPEEIPWGSAGADIIVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNEHEYKPELDIISNASCTTNYLAPLAKVINDRFGIVEGLMTTIHSITVERGRNINYVLEQYAKFVKPAFDDFVLPSKKYADVTVPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYPNVYVIQSTFRPYNSDISETGAFSQNPALVLTPVVPRYALVTVVQSSFGEVLSAISVINNNEYIWWKANARETKEELINRGPMFLD 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g01413 295 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 71 84 IPR020831 GO:0016620
Adu09g01413 295 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 133 149 IPR020831 GO:0016620
Adu09g01413 295 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 106 124 IPR020831 GO:0016620
Adu09g01413 295 Pfam Phosphoribulokinase / Uridine kinase family 142 187 IPR006083 GO:0005524|GO:0016301
Adu09g01413 295 Pfam Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 1 65 IPR020828 GO:0051287
Adu09g01413 295 PANTHER GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE 1 143 - -
Adu09g01413 295 ProSitePatterns Glyceraldehyde 3-phosphate dehydrogenase active site. 110 117 IPR020830 GO:0016620
Adu09g01413 295 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 128 IPR036291 -
Adu09g01413 295 Pfam Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 117 143 IPR020829 GO:0016620
Adu09g01413 295 Gene3D - 1 127 - -
Adu09g01413 295 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 111 218 - -
Adu09g01413 295 SMART gp_dh_n_7 1 112 IPR020828 GO:0051287
Adu09g01413 295 Gene3D - 128 213 IPR027417 -
Adu09g01413 295 PANTHER GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE 1 143 IPR020831 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g01413 Adu-Chr9 39543985 39546750 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g01413 134 220 PRT Gene Family AT5G40870 82.759 2.72e-44 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g01413 K00134 - thj:104824027 261.536