Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g01371 ATGACCTCCGTTTTGCATAACTGTCCAAATGACAGAATTATCCTTCTCTCCTCCTTTCTCTTTCACCTCCTTCTCTTCTTTCCCTTCATCGGAGCACAATCCGATAACAACAACCAAAACAACTCTTACTACAACCGTTTCAGCCCTTCCATGGCGATAATAGTTGTAATCCTCGTCTCCGCACTCTTCCTCATGGGATTCTTCTCCATCTACATCCGCCACTGCTCCGACTCTCCTTCCGTCAGCATCCGCCACCTTGTCGCCACCGGCAGATCCCGCCGCGGTCCACGAGGTCTCGACCCTGCCGTCATCCACTCGTTCCCAACCTTAGAATACTCAGTCGTAAAAATCCACAAGATTGGAAAGGGAGCACTCGAATGCGCAGTGTGCCTCAACGAGTTTGAAGACACTGAAACGCTGCGTTTGATTCCCAAATGCGACCACGTATTCCACCCTGAGTGTATCGACGAGTGGCTCGAGTCTCACACCACGTGTCCAGTTTGCAGAGCCGACCTCCTCCCACAACCGGGAGACTCCGTACGCGGCGCCGCCGCCGTCGTGATTTCAGAGTTGGCAAACGACCAGTTGTCCTCGCCGCGCAATTTGGAATCGCGGAACCAAAGCGACGTCGTAGTTGCTGTGGAGCAAGAAAGTGATGAGAATCTGGAGAATAATAAGAATGAAAGGAAGATTCTAGAACCTCAGTTGAACCGAGCGAGGAGCTTGGTTATTTTGCCGAGAGAAGGGAGCTCAAAGAGGGGTTACCGAACTGGGGGCGGAGAAGGAAGTAGTAGGGGCCGGTCTACAAGGCGGTTAGACCGGGTTTTTAAGTCGGACCGGTGGATTTTCACTATGGCGCCACCGTTTCTCGTTAGGGCGTCGTCAATTAAGTCACCACGGGTGGCTAATAGCGCCGCCGGCGGAAGTTCATCGGCTGCTCCAGCAGCTGCACCACCAGTTCTGACTGCCCCATCAGCAACATCAGAAATACACCATTTACCGGTTTAA 1008 0.5268 MTSVLHNCPNDRIILLSSFLFHLLLFFPFIGAQSDNNNQNNSYYNRFSPSMAIIVVILVSALFLMGFFSIYIRHCSDSPSVSIRHLVATGRSRRGPRGLDPAVIHSFPTLEYSVVKIHKIGKGALECAVCLNEFEDTETLRLIPKCDHVFHPECIDEWLESHTTCPVCRADLLPQPGDSVRGAAAVVISELANDQLSSPRNLESRNQSDVVVAVEQESDENLENNKNERKILEPQLNRARSLVILPREGSSKRGYRTGGGEGSSRGRSTRRLDRVFKSDRWIFTMAPPFLVRASSIKSPRVANSAAGGSSSAAPAAAPPVLTAPSATSEIHHLPV 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g01371 335 ProSiteProfiles Zinc finger RING-type profile. 127 169 IPR001841 -
Adu09g01371 335 PANTHER RING FINGER DOMAIN-CONTAINING 20 220 - -
Adu09g01371 335 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 87 174 IPR013083 -
Adu09g01371 335 Pfam Ring finger domain 126 169 IPR001841 -
Adu09g01371 335 MobiDBLite consensus disorder prediction 247 271 - -
Adu09g01371 335 CDD RING-H2_EL5_like 126 169 - -
Adu09g01371 335 MobiDBLite consensus disorder prediction 301 335 - -
Adu09g01371 335 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 20 220 - -
Adu09g01371 335 SUPERFAMILY RING/U-box 122 176 - -
Adu09g01371 335 SMART ring_2 127 168 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g01371 Adu-Chr9 35857976 35859203 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g01371 32 318 Rapid Response to Elicitors AT3G05200 41.337 4.18e-65 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g01371 K10664 - gmx:100810865 351.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g01371 09 35857976 35859203 Adu09g01371 09 35857976 35859203 ECH
Adu06g00384 06 4631868 4633329 Adu09g01371 09 35857976 35859203 PCT