Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g01349 ATGTCGAAATGTCGAAAAGAAACTGTAAATTACGGGATAAATTACGGGATCTATTCCTGTGTTCTGACCATTCAATTCATACAGCTGAACCAGACCGAAGTCATGGCTCAGTCATCTCGAATCTCTCCCAAAAGGtacgatgtattcattagcttccgtggggaagacacacggaccggtttcactagccaccttctcgatgctctcatcaacaagggaatcgaaacgtacatagattaccgacttcgaagaggggatgatatctgggattcactttgtaaagcaatcaaggaatcgcatatatccatcgttgttttctctgaagattacgctgcttcaaaatggtgcttgcaagaactggctgaaataataaaatgcagaagagaacaggggcaggttgttattcctgtgttctacgaaacggatccttcacaaattcgggatcagagcgagagttGCAAGATTGTTAGCAAGGGGAATGATGAATTGGAAGTACAGAGATGGATTGATGCTCTCACTGAGGCCGCAGATCTATATCCATCCTACTCACAAAGCTCTGGCAATAGGGACGAGTCTCTACTCATCAAGGATGTTGTCAAACATGTTATGCAAAAGCTGCTGGAACTTAGATATTCCAAGATTACAAAAGGGCTTGTTGGAATTGATGAAGCTCGTAAAGACATTGAATTATCAATGAAAAATGCTCGAAGAATTGGAATTTGGGGTATGGGAGGAATAGGAAAAACGACCATTGCTAAAGTCGTGTTTGCCAACCTTTCTCCCCAATATGACGGTGTTTGCTTCCTGACAAATATTTCAGAGGAATCAAAACACAAGGAATTAGCATATTTGCGTAACAAGCTCTCAAAGCTACTAAAGGAAATTAAACATGTCCATGAGGATGTAGGAACTACCCACACAACAGTGAGAATGAACAGTAagaaagttctcattgtgcttgatgatgtggatactcttgagcaattagagtatttgtgtggagagtctgaagttctcaataatctaccagaagctagcagagtcattattacaacaagaaataggcgtttgcttatcggtaaagttgatgagatatacgaggtcaagccattgaaccccaaagaatcactaaagcttttcagcctaaaagccttcagggaaagccatcccaaaaagggatatgagcaactctcaaaacaagtggtagaatatgcaggaggcattcccctcgctctaaatgaattgggtttgtatctccactccaggtctgtaaaattttgggagagtactttgagaaaacttagaaaatctcctaaggtagacattcgaaacatgttaagagtgagctatgatggattaaagcctctagagcagaagatatttctggacattgcattcttcttcaaagatgaaaagaaagaccttgcaataaggatacttgatgcttgtggttctgaagcAAGTAGTGGGATAGACGTACTTGAAGATAAAGCTTTGATAACCATTTCATCATGTGATCATAGAATTCAAATGCATGACTTGTTGCGGGTAATGGCTTTGGAGATAGTGTACCGAGACTCTGAATCAGGACCTGGAGGATGCAGCAGATTGATGGATGTTGAAGACATTTATAATGTACTTGAAAACAACACTGGAACTAATGCAGTTGAAGGCATAATTTTGGACTTGTCTAAGATAAAAGATTTACACTTGAGTTCAGACACATTCGGAAATATGAATAATATAAGGTTTCTCAAGTTTCATATCCCGAAAGGTAAGAGTCCCAATATTACGTACCTACCAGAAGGCCTTGAACAATTTCCTAAAGAATTAAGGTACCTAGAGTGGGATAGATACCCATTGAAGTCTTTTCCACCAAGTTTTCGTCCAGAGTTGCTTGTTGAAATTCACATGCGCCAAAGTGATGTTGAAGAACTTTGGGAGGGTGTGGATGTAAAGAATCTAAACAATCTGGAAGTAGTTGACCTGAGAGAATGCAGAAAGTTGGCGAACCTTCCAGATTTATCTAATGCATCAAGACTTAAATGGGTGAATCTCTCCGGTTGTGAGAAGTTGTGTTATCTTCATCCATCGGTTCTATCTTCTGATACACTTGATACCTTGATACTGGATGGGTGCAAAAAGCTCATTCAGGTTAAAAGTGAGAAGCGCTTAGAATCTCTAAAGAAGATCAGTGTTAATGGCTGCTCAAGTCTTAAGGAATTTGAAGTGTGGTCAGATTTAATCGAAAAATTAGATCTAAGCAAGACAGCAATTGAATCATTGCACACATCCATTGGGAGTATAAACAATCTTAGGTCACTCAATCTAAAAAGTTTAAGACTTGAGCATCTTCCAACCGACTTATCTGCCTTGAAATCTCGAGTATCTTAA 2394 0.2531 MSKCRKETVNYGINYGIYSCVLTIQFIQLNQTEVMAQSSRISPKRYDVFISFRGEDTRTGFTSHLLDALINKGIETYIDYRLRRGDDIWDSLCKAIKESHISIVVFSEDYAASKWCLQELAEIIKCRREQGQVVIPVFYETDPSQIRDQSESCKIVSKGNDELEVQRWIDALTEAADLYPSYSQSSGNRDESLLIKDVVKHVMQKLLELRYSKITKGLVGIDEARKDIELSMKNARRIGIWGMGGIGKTTIAKVVFANLSPQYDGVCFLTNISEESKHKELAYLRNKLSKLLKEIKHVHEDVGTTHTTVRMNSKKVLIVLDDVDTLEQLEYLCGESEVLNNLPEASRVIITTRNRRLLIGKVDEIYEVKPLNPKESLKLFSLKAFRESHPKKGYEQLSKQVVEYAGGIPLALNELGLYLHSRSVKFWESTLRKLRKSPKVDIRNMLRVSYDGLKPLEQKIFLDIAFFFKDEKKDLAIRILDACGSEASSGIDVLEDKALITISSCDHRIQMHDLLRVMALEIVYRDSESGPGGCSRLMDVEDIYNVLENNTGTNAVEGIILDLSKIKDLHLSSDTFGNMNNIRFLKFHIPKGKSPNITYLPEGLEQFPKELRYLEWDRYPLKSFPPSFRPELLVEIHMRQSDVEELWEGVDVKNLNNLEVVDLRECRKLANLPDLSNASRLKWVNLSGCEKLCYLHPSVLSSDTLDTLILDGCKKLIQVKSEKRLESLKKISVNGCSSLKEFEVWSDLIEKLDLSKTAIESLHTSIGSINNLRSLNLKSLRLEHLPTDLSALKSRVS 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g01349 797 Gene3D Ribonuclease Inhibitor 539 796 IPR032675 -
Adu09g01349 797 SUPERFAMILY Toll/Interleukin receptor TIR domain 35 178 IPR035897 -
Adu09g01349 797 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 39 778 IPR044974 GO:0006952
Adu09g01349 797 SUPERFAMILY L domain-like 559 793 - -
Adu09g01349 797 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 39 778 - -
Adu09g01349 797 SUPERFAMILY "Winged helix" DNA-binding domain 441 547 IPR036390 -
Adu09g01349 797 ProSiteProfiles TIR domain profile. 44 206 IPR000157 GO:0007165
Adu09g01349 797 SMART till_3 45 178 IPR000157 GO:0007165
Adu09g01349 797 Pfam TIR domain 46 220 IPR000157 GO:0007165
Adu09g01349 797 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Adu09g01349 797 PRINTS Disease resistance protein signature 405 419 - -
Adu09g01349 797 PRINTS Disease resistance protein signature 653 669 - -
Adu09g01349 797 PRINTS Disease resistance protein signature 237 252 - -
Adu09g01349 797 PRINTS Disease resistance protein signature 310 324 - -
Adu09g01349 797 Gene3D - 371 454 IPR042197 -
Adu09g01349 797 Pfam Leucine Rich Repeat 633 650 IPR011713 -
Adu09g01349 797 Gene3D - 205 363 IPR027417 -
Adu09g01349 797 Pfam NB-ARC domain 233 451 IPR002182 GO:0043531
Adu09g01349 797 Gene3D - 43 204 IPR035897 -
Adu09g01349 797 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 202 464 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g01349 Adu-Chr9 34387501 34394635 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g01349 42 793 WRKY Transcription Factor Family AT4G12020 32.380 2.93e-93 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g01349 - - adu:107465413 1484.16