Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g01346 ATGGAAAACTACGACGCGAAGTTTCTATGCACCTACGGAGGCGAGATCAAACGCCGCCTTAACGACACCAAGATCTCCTACGTCGGTGGCCTCAACAAGATCCTCTACGTTAACCGTGGAATCGACTTCACCGCCATGCTCGCCGAACTTTCCGCCCTCTTTGACGCCGCCGGCAACATCTGCTTCAAGTACCTACTCCCCAACGATGAACTCGATGCCCTCATCTCCGTCACCGGTGACAACGACCTGAACAACATGATGCTCGAGTATGATAATCTCTACAGAGATTCCCCTAAAACCGCTCGCATAAGGCTCTTCGTCTTCCCTGGCAACCATTTCAATTTGGATCGCAATCCCGCTTCCACCGAAACCCTAAAAACCAAGAAGACAGTCAAACAAAACTCCAAAGTCAACGGCGACAGTTTAGTTGTTGTTCTTCCGCCTCCGCCAGTTGATGTTAAAACAGAGCGGATTGATTGTTCTGATCCGACCCGATTTAATAGCCTGTTATCTGCTGCAAAGtatgatgtgtttctgagcttcagaggcgaagacacacgcaacggtttcacttcccatctttgtaaagctctgtcgcgaaagcaggtaaagaccttcgtggattttactgttcagaagggaaatgagatctctgcttcgatccaccaagcaattgaagagtcgttcgtatcggtggttgtgttctcggagaactatgcttcttcaaagtggtgcttggaagagcttgtgaaaataatggagtgcagtaaagaaaatggactggttgctgttcctgtgttctataaaatagatcgatcacatgtgcggaagcagcttggaagttacagtgaagcattaaagaagttacaaaataatagcatgaagaaggttcagaaatggagggaagctctcactgaagcagcaaatttatctgggtgggtctccaGCTCCTGCAGGGATGAGTCTGAGCTCATTCAAAAGATTGTGAAAGACGTTTTGCAGAAGCTGATTGATCACAACCCACCGAATGATATTAAAAGTTTTGTAGGTATTGACGGAAATCTTAAAGCTATAGATTCGTCGCTAAGAGAAGTCCTTGAAGTCCAAACAAGAATGATTGGAATTTGGGGCATGGGTGGGATAGGAAAGACCACTCTAGCAAAACTTGTATTCGAGAAATACTCTTATCAGTATGAAGGTTCCTGCTTCTTGGAAGATGTTAGAGAAAGATCAGAAAAATATGGACATTCGCTATATGAATTACGCAATGAACTTTACTCAGAGTTGTTGCAGGAAAATAATTGCAAAGACAGCACAAGAAAATCCACCAATGCTAAGGAAAGGCTCCGCAGTCAAAGAAATTTCATAgttcttgatgacgtgagttgttcaaagcaattaaaataccttgttggggagcatcaatgttatggtccaggtagtaagatcattgtcacagctacagacaagagtgtatttgctcaatgggaagatgaagaaatatatgagatgaaggtgttaaattctgaggactcccttacattgtttagcttgaatgcattcaatcaagaccatccgaaaatgggatatgaaaatctatcatgggaagcagttaaatattgtgaaggtttaccattagctttgaaagtgttgggttcttttcttcgttccaagagtgaaactgaatgggatagtgcattgcgaaacatcaagaagattcctgacgcaccaattcaaaatgtattaaggttgacctatgaaggattaaattatgaggagagagaaatttttctagacattgcatgtttttttaagggattccttaaagaacacgtagttagtctgttagaaagttgtggcttcgatgcagCTAATGGCATGAGGTCCCTTCATGATAAGTCTCTAATAGCTATATCTGATAATTCTCTGAGGATGCATGACTTGATCCATGAAATGGCTTTGGAAATTGTTCGCAAAGAATCTATCAAAAATCCTGAATATCGTAGCCGTTTGTGGGACTATAATGATATTAGGGATGTTTTGGGAAACAACAAGGGAACTGATGCAATTGAAAGCATAATGTTAGATATGTCTCATATAGATGATCTACAGTTGAGTGCTGACACATTCAAAAAGATGTCTAGATTAAGATTGCTCAAATTGTATGACTCGTCAGAGAAGCATGGTAAATTAAGTAATCTGCAGCTTCCTATAGGGTTGAAGCCATTAAGGTACTTTGAATGGCATGCGTACCCTTTGCCGACTCTGCCATCAAACTTTTGTCCCGAGAAGCTTGTTACCCTCCGTATTCAGAACAGTCAACTTGCAAGACTATGGGATGGAAAGCAGAATCTTGTGAATTTAGAGGAAGTAGATCTAACTGGGTGCCAAAAGTTGGTTGAACTCCCAGATCTCTCTAAAGCAAAAAATCTTAAAAGTGTACAGCTGTCCAACTGTAGAAGTTTGGCCCATGTGCATCCATCTATTTTATCACTTGGCAAGCTTGAGCTTTTGGATCTATTGAATTGCATTAAGCTTGAAATGCTCGGAAACAAGAAGCATTCAAGATCTCTTAAGCACCTGTGCGTTGCTGGCTGCTCAAATTTGTTAGAATTTGCTCTATCTTCAGAAGAAATAGAATACTTGGATTTAAGCCACACTGGCATCAAAGTATTGCACCCATCTATTGGGCGTTTCACCAAAGTGAAAGAGATATCTCTTTGTGGGATAAGACTTGAGAATCTTCCAGACGGGTGGTCTCGCTTGAAATCTCTTGAGAAACTTTCGCTCTTTAAATGTGGAAGGGTGGTTTCCAAGCAGAAATTACATGATATATTTGATGGCTTGCAATCATTGCAAAACCTGTCTCTGGTGAACTGTGATAGTCTATTTGAACTCCCTGGAAATGTCGGCCGCTTATCATCGTTACAAAAGTTACAGTTGGATGGAAGCCATGTGGAGACTTTGCCTGGGAGCATCAAGCATCTTCCAAATCTGAAAACACTCTCATTAATAGGTTGTAAGATGCTTCAATATTGGCCAGAGCTTCCTCCATCCATTCGACATTTGAAGGCCCTAAACTGCACATTGCTGCAAAAAGTAGCATTTGGTTTATTTAGTTATGAGCTACAAGAAGAAAAACGCGTAAGTATTTCGTTGCAGAATTGTGTGAATTTGGATGTGGAGAACTGTATTTATTCATTCCTTCAACATGTAAGAAAACAGGCATATGAATGTGAATTTAGGAGGAGAGGAGTAGGAAGAGAAAACATTGTAGTTTGGAGAAGTGACTTCTTTAAAATTTGTTACCCGGACTCCAGAGTACCAGAGTGGTTCACATATCGGGCAGTGGGGTCTTCTATTACTTTTGAAGTTGCTCCTCCTTCCAGTTACTATTTTGGTTCACTTCTCTGCATTGTTCTCTCTTCGCACAGTTTGGATTTCGAGCTTGATATTAAATGCAGATGCTACTTGGAAGATGGAAAAATGCACAAGTATTCGCTTGGCATATTATTTTTAAGTCACGTTCCAGTGGAAGGGCATTCAGATCATGTTTATATGACGTATAACTTCAACAGAATCTTCGATGTGATCAAGCTGGACCAATTGAATAATAAGATTGCCTCCTCCGGACATAAACCAAAACTCACCTTTGAATTCTTTGTTAGCAGTGGCATGGCTCAGGGAAAAAAAGATTTAAATTTGTTGATCAAAGAGTGTGGTGTCTATCCGTTAAATGACTCCAATAAATTTGTTGATCAAAGAGTTGGAAGTTCCAATTAG 3783 0.3103 MENYDAKFLCTYGGEIKRRLNDTKISYVGGLNKILYVNRGIDFTAMLAELSALFDAAGNICFKYLLPNDELDALISVTGDNDLNNMMLEYDNLYRDSPKTARIRLFVFPGNHFNLDRNPASTETLKTKKTVKQNSKVNGDSLVVVLPPPPVDVKTERIDCSDPTRFNSLLSAAKYDVFLSFRGEDTRNGFTSHLCKALSRKQVKTFVDFTVQKGNEISASIHQAIEESFVSVVVFSENYASSKWCLEELVKIMECSKENGLVAVPVFYKIDRSHVRKQLGSYSEALKKLQNNSMKKVQKWREALTEAANLSGWVSSSCRDESELIQKIVKDVLQKLIDHNPPNDIKSFVGIDGNLKAIDSSLREVLEVQTRMIGIWGMGGIGKTTLAKLVFEKYSYQYEGSCFLEDVRERSEKYGHSLYELRNELYSELLQENNCKDSTRKSTNAKERLRSQRNFIVLDDVSCSKQLKYLVGEHQCYGPGSKIIVTATDKSVFAQWEDEEIYEMKVLNSEDSLTLFSLNAFNQDHPKMGYENLSWEAVKYCEGLPLALKVLGSFLRSKSETEWDSALRNIKKIPDAPIQNVLRLTYEGLNYEEREIFLDIACFFKGFLKEHVVSLLESCGFDAANGMRSLHDKSLIAISDNSLRMHDLIHEMALEIVRKESIKNPEYRSRLWDYNDIRDVLGNNKGTDAIESIMLDMSHIDDLQLSADTFKKMSRLRLLKLYDSSEKHGKLSNLQLPIGLKPLRYFEWHAYPLPTLPSNFCPEKLVTLRIQNSQLARLWDGKQNLVNLEEVDLTGCQKLVELPDLSKAKNLKSVQLSNCRSLAHVHPSILSLGKLELLDLLNCIKLEMLGNKKHSRSLKHLCVAGCSNLLEFALSSEEIEYLDLSHTGIKVLHPSIGRFTKVKEISLCGIRLENLPDGWSRLKSLEKLSLFKCGRVVSKQKLHDIFDGLQSLQNLSLVNCDSLFELPGNVGRLSSLQKLQLDGSHVETLPGSIKHLPNLKTLSLIGCKMLQYWPELPPSIRHLKALNCTLLQKVAFGLFSYELQEEKRVSISLQNCVNLDVENCIYSFLQHVRKQAYECEFRRRGVGRENIVVWRSDFFKICYPDSRVPEWFTYRAVGSSITFEVAPPSSYYFGSLLCIVLSSHSLDFELDIKCRCYLEDGKMHKYSLGILFLSHVPVEGHSDHVYMTYNFNRIFDVIKLDQLNNKIASSGHKPKLTFEFFVSSGMAQGKKDLNLLIKECGVYPLNDSNKFVDQRVGSSN 1260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g01346 1260 CDD PB1_UP2 9 108 - -
Adu09g01346 1260 Gene3D - 334 504 IPR027417 -
Adu09g01346 1260 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 167 1180 IPR044974 GO:0006952
Adu09g01346 1260 SUPERFAMILY CAD & PB1 domains 22 114 - -
Adu09g01346 1260 Pfam C-JID domain 1104 1242 IPR045344 -
Adu09g01346 1260 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 167 1180 - -
Adu09g01346 1260 SUPERFAMILY Toll/Interleukin receptor TIR domain 171 313 IPR035897 -
Adu09g01346 1260 SMART PB1_new 20 108 IPR000270 GO:0005515
Adu09g01346 1260 SMART till_3 174 310 IPR000157 GO:0007165
Adu09g01346 1260 ProSiteProfiles TIR domain profile. 173 336 IPR000157 GO:0007165
Adu09g01346 1260 Pfam TIR domain 174 341 IPR000157 GO:0007165
Adu09g01346 1260 Pfam PB1 domain 22 109 IPR000270 GO:0005515
Adu09g01346 1260 Coils Coil 272 292 - -
Adu09g01346 1260 Pfam NB-ARC domain 355 571 IPR002182 GO:0043531
Adu09g01346 1260 Gene3D - 171 333 IPR035897 -
Adu09g01346 1260 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 333 600 IPR027417 -
Adu09g01346 1260 Gene3D - 506 590 IPR042197 -
Adu09g01346 1260 SUPERFAMILY L domain-like 644 1037 - -
Adu09g01346 1260 PRINTS Disease resistance protein signature 372 387 - -
Adu09g01346 1260 PRINTS Disease resistance protein signature 448 462 - -
Adu09g01346 1260 PRINTS Disease resistance protein signature 541 555 - -
Adu09g01346 1260 PRINTS Disease resistance protein signature 783 799 - -
Adu09g01346 1260 Gene3D Ribonuclease Inhibitor 877 1078 IPR032675 -
Adu09g01346 1260 Gene3D Ribonuclease Inhibitor 680 871 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g01346 Adu-Chr9 34236060 34242997 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g01346 171 979 WRKY Transcription Factor Family AT4G12020 33.816 3.25e-101 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g01346 - - adu:107472645 2234.14