Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g01343 ATGGAGAATTACGACGTGAAGTTTCTCTGCAGCTATGGTGGCGAGATCCACCACCGCCCCAACGACAAGAAGATCTCCTACGTCGACGGCCACAACAAGCTCCACTACGTTAACCGTGGAATCGACTTCACCGCCATGCTCACCGAACTCTCCGCCCTCTTTGACGCAGCCGGTGACATCCACTTCAAGTATCAGCTCCCCAGCGATGACTTTGACGCCCTAATATCCGTCACCAGCGACAGCGGCCTAAACAGCCTGATGCTTGAGTATGATAACCTCTACAGAGATTCCCCTAAAACCGCTCGGATGAGATTATTCATCTTCCCTGGTAACGGTCCTGATTCTGCGTCCACCCAACCTTTCCCAGCTAAACTGAAATCCAAAGTCAACAACGGTGCTGTTGTTCCTCCGCAAATTATGCCGGTGAAGTTCCAAGATCTGCCACCGGTTAACAATTTTAATACCTTAGACCGGGTGTTGGATTCGGATCCAAAAGTGAATCGACCGATTGAAGATTCCGGTTCTTCCTGTTTGAATAGTTTGTTACCTGATTTACATAAACTTAAAAGACTTTGGGATGTGGTTCAGAATCTTGTTAATTTAGAGAAAGTAGATCTAACAGATTCCCAAAAGTTGGTGGAGCTTCCGGATTTCTCCAAGGCAGATAATCTCAAAAGTGTTTATTTATCAAAATCTTAG 699 0.4621 MENYDVKFLCSYGGEIHHRPNDKKISYVDGHNKLHYVNRGIDFTAMLTELSALFDAAGDIHFKYQLPSDDFDALISVTSDSGLNSLMLEYDNLYRDSPKTARMRLFIFPGNGPDSASTQPFPAKLKSKVNNGAVVPPQIMPVKFQDLPPVNNFNTLDRVLDSDPKVNRPIEDSGSSCLNSLLPDLHKLKRLWDVVQNLVNLEKVDLTDSQKLVELPDFSKADNLKSVYLSKS 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g01343 232 Pfam PB1 domain 21 109 IPR000270 GO:0005515
Adu09g01343 232 CDD PB1_UP2 9 108 - -
Adu09g01343 232 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P 5 114 - -
Adu09g01343 232 SMART PB1_new 20 110 IPR000270 GO:0005515
Adu09g01343 232 PANTHER OS05G0427100 PROTEIN-RELATED 5 114 - -
Adu09g01343 232 SUPERFAMILY CAD & PB1 domains 22 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g01343 Adu-Chr9 34208808 34211659 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g01343 2 108 MAP Kinase Kinase Kinase AT5G57610 41.121 3.23e-19 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g01343 - - ahf:112709080 336.65