Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g01334 ATGGAGAATTACGACGTGAAGTTTCTCTGCAGCTATGGCAGCGAGATCCACCACCGCCCCAACGATAAGAAGATCTCCTACGTCGGCGGCCACAACAAGCTCCACTACGTTAACCGTGGAATCAACTTCACCGCCATGCTCGCCGAACTCTCCGCCCTCTTTGACGCCGCCGGTGACATCCACTTCAAGTATCAGCTCCCCGGCGATGACTTCGACGCCCTAATATCCGTCAGCAGCGACAGCGGCCTAAACAGCCTGATGCTTGAGTATGATAACCTCTACAGAAATTCTCCTAAAACTGCTCGGATGAGATTATTCATCTTCCCTGGTAACGGTCCTGATTTTGCGTCCACCCAACCTTTCCCAGCTAAACTGAAATCCAAAGTCAACGGTGGTGCTGTTGTTCCTCCGCAAATTACGCCGGTGAAGTTCCAAGATCTGCCACCGGTTAATAATTTTAATACCTTAGACCGGGTGTTGGATTCGGATCCAAAAGTGAATCGACTGGTCGAAGATTTCGGTTCTTCCCATTTGAATAATCCGTTACCTGCTTTACAGGACGAAATTGAATTCATTCAAAATATTATCAAAGATATTTTGCAGAAGCTGATTGACCATTACCCACCCAATGATAGTAAAAGTCTCGTTGGCATTAGTGAAAATCTTGAAAAGATGCATGACTTGATCCAAGAATTAGGTTGGGATATCGTTTGTCAACAATCTAGTGAAAATCCTGAAAATCGTAGCCACTTGTGGGATTCTAATGATATTCGGGATGTTTTGGGAAACAACAAAATACTTGGAGTGGGATGCTACCCTTTGCCATCTCTGCCATTGAATTTTTGTCCTGAGAAGCTTGTTACTCTTCGCATCCGGAACAGTAAACTTAAAAGACTTTGGGATGGGATTCAGAATCTTGTTAATTTAGAGGAAGTAGATCTAACAGATTCCCAAAAGTTGGTAGAGCTTTCGAATTTCTCCAAGACAGATAATCTCAAAAGTGTTTATTCACCCCCCAAGGCATATTCTTGCCTCGTACCTGTAGCTTTGGAGGATTTTGGAAGGTCACTGGTGTCTTGTATGGATTGGGAAGGAAAGATGACTTTTCTCTCAAAACAATCTAACAAGACTCAGTTTTTGTTGAGCCAATCCATTCCTAGGATGATGTCTAATCCTACTAAAGGGAGGCACACTAGGTCAGCAAGAGGGTGGAGGAACTCCTGGGCATTCCCTGGCGATATGCCCCGACTGAAAACATCGGAAGCAGACATTTTGCCCGGCAAGGCACCTACCCCTATGTTGCTTCCCACACGAAGCACACTCCTTGAGTTCGGTGTTCTTTGGGTCGAGGGCCCCACGGAACTCAGGCGGACCGATCTTCTTAAAGTCAGCAAAAGACGTACTGGTTTGTCCTTCCTCCAGCCTGGGAGTATTGGGACCCCTGTCCTCAGTGAACAGTTATTGAGCCATCAGGGTAGTGGCTTGGGCCTGTTCCTTCATCACCTTGGCCATCTCCTTCATGTGCTTTGCAAGGGCTGA 1539 0.4633 MENYDVKFLCSYGSEIHHRPNDKKISYVGGHNKLHYVNRGINFTAMLAELSALFDAAGDIHFKYQLPGDDFDALISVSSDSGLNSLMLEYDNLYRNSPKTARMRLFIFPGNGPDFASTQPFPAKLKSKVNGGAVVPPQITPVKFQDLPPVNNFNTLDRVLDSDPKVNRLVEDFGSSHLNNPLPALQDEIEFIQNIIKDILQKLIDHYPPNDSKSLVGISENLEKMHDLIQELGWDIVCQQSSENPENRSHLWDSNDIRDVLGNNKILGVGCYPLPSLPLNFCPEKLVTLRIRNSKLKRLWDGIQNLVNLEEVDLTDSQKLVELSNFSKTDNLKSVYSPPKAYSCLVPVALEDFGRSLVSCMDWEGKMTFLSKQSNKTQFLLSQSIPRMMSNPTKGRHTRSARGWRNSWAFPGDMPRLKTSEADILPGKAPTPMLLPTRSTLLEFGVLWVEGPTELRRTDLLKVSKRRTGLSFLQPGSIGTPVLSEQLLSHQGSGLGLFLHHLGHLLHVLCKG 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g01334 512 SUPERFAMILY L domain-like 224 335 - -
Adu09g01334 512 CDD PB1_UP2 9 108 - -
Adu09g01334 512 SMART PB1_new 20 110 IPR000270 GO:0005515
Adu09g01334 512 PANTHER OS05G0427100 PROTEIN-RELATED 5 119 - -
Adu09g01334 512 SUPERFAMILY CAD & PB1 domains 22 117 - -
Adu09g01334 512 Gene3D Ribonuclease Inhibitor 179 371 IPR032675 -
Adu09g01334 512 Pfam PB1 domain 21 109 IPR000270 GO:0005515
Adu09g01334 512 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P 5 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g01334 Adu-Chr9 34089622 34096963 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g01334 2 186 MAP Kinase Kinase Kinase AT5G57610 31.980 1.07e-18 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g01334 - - adu:107464414 341.273