Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g01295 ATGGAGAGTAACAGTAGAAGTAGTAGTAATAATGAGGATATGAGTTTGCCGATTGCAAATGTGGGAAGAATAATGAAGCAAGTGGTGCCAGGAAGTGGAAAGATCTCAAAAGAAGGGAAGCAGTTAATGCAAGAGTGCGTGACAGAGTTCATAAGCTTTGTGACGGGTGAGGCCTCTGCCAAGTGTCACAAGGAGAATCGAAAGACCGTTAACGGCGACGACATCTGCTGGGCGCTTTCTTCCTTAGGGTTTGACAACTACGCCGAGGCCATCTCCAGGTACTTGTATAAATACCGCCTTGCTCACACTCACAGGGAACAAAACCTTCTTTCCAACAATAACAACAACAAAGAACATTCTAGAGTTTAG 369 0.4472 MESNSRSSSNNEDMSLPIANVGRIMKQVVPGSGKISKEGKQLMQECVTEFISFVTGEASAKCHKENRKTVNGDDICWALSSLGFDNYAEAISRYLYKYRLAHTHREQNLLSNNNNNKEHSRV 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g01295 122 Gene3D Histone, subunit A 3 121 IPR009072 GO:0046982
Adu09g01295 122 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 14 79 IPR003958 -
Adu09g01295 122 SUPERFAMILY Histone-fold 12 111 IPR009072 GO:0046982
Adu09g01295 122 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 10 119 IPR027113 GO:0001228|GO:0006355|GO:0016602
Adu09g01295 122 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-4 10 119 - -
Adu09g01295 122 PRINTS CCAAT-binding transcription factor subunit A signature 43 61 - -
Adu09g01295 122 PRINTS CCAAT-binding transcription factor subunit A signature 62 80 - -
Adu09g01295 122 PRINTS CCAAT-binding transcription factor subunit A signature 81 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g01295 Adu-Chr9 32731650 32732075 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g01295 11 120 CCAAT-HAP3 Transcription Factor Family AT1G09030 64.865 8.41e-50 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Adu09g01295 CBFD_NFYB_HMF 1.2e-25 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g01295 K08065 - gmx:100815151 162.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g01295 09 32731650 32732075 Adu09g01295 09 32731650 32732075 ECH