Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g01264 ATGGGTCTTGGGATGAAATATGACGAAGAAAGCAAGGTGGTTGACGATGGAGGAGAGGGTGGCGGTGGTGGAGCTAATTCGTTTGATTCTGTCTCATGTTCAATTTGCCTTGACGCTGTTATCGATAATGGGGATCGATCGTTGGCTAAGCTTAAATGTGGCCATCAATTTCATCTTGATTGTATTGGTTCAGCATTCAATATGAAAGGAACAATGCAATGCCCTAATTGTCGAAAGATTGAGAAAGGTCAATGGCTTTATGCTAATGGTGGCCGGTCATATCATGATTACAGTATGGATGATTGGACTCATGATGAGGACCTTTATGACCTTAGCTACTCTGAAATGTCCTTTGGAGTTCATTGGTGCCCATTTGGCAACTTGGCGAGACTTCCATCATCTTTCGATAGTCGTCTAGTTGCCGGTGATCGCCGGTCGATATCTCCTCGGACTCAAAGGCCATCCAGGGGTGGCTCAGAGGTACCAAGATCAAGTTCTTATATGCATCCTCCTGGGGGTCACAGTTCTTCAGGTTCTGTGAGCTCAGTTACTTCCTCAATGCTACCTCCTTATCCTGGTAGCAACGCTCGATCCCGTGATAGTGTTCAAGCGCTTCAAGCTTACTATCAATCACCAATGCGAACACACGTTCCTTCTGGATCCCGAAGATCTGGTAATCATAGTGGATCACCTCAAATTGCACCATTTTCCACATCACCGGACCAAAGCGGTTTCTTTTTTGTCCCATCAAGTTCTTCAGGTCGTAGTAGTTTTCCAGAAGATGCATGTCTCCCAAGTCGCTACCATGCTTGGGAACGAGAGCACATATCTTCTTTAAGCATTGTTGATAGAGATTCAGGCTGGAGACAATACCACCAAACTGTTGGTAGGTCAGAACGCTCTAGCAACTATCGATTAAGGCGTGCATCCGAAAGAATGCATTCCCATAATCGATGA 957 0.4545 MGLGMKYDEESKVVDDGGEGGGGGANSFDSVSCSICLDAVIDNGDRSLAKLKCGHQFHLDCIGSAFNMKGTMQCPNCRKIEKGQWLYANGGRSYHDYSMDDWTHDEDLYDLSYSEMSFGVHWCPFGNLARLPSSFDSRLVAGDRRSISPRTQRPSRGGSEVPRSSSYMHPPGGHSSSGSVSSVTSSMLPPYPGSNARSRDSVQALQAYYQSPMRTHVPSGSRRSGNHSGSPQIAPFSTSPDQSGFFFVPSSSSGRSSFPEDACLPSRYHAWEREHISSLSIVDRDSGWRQYHQTVGRSERSSNYRLRRASERMHSHNR 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g01264 318 MobiDBLite consensus disorder prediction 143 200 - -
Adu09g01264 318 SUPERFAMILY RING/U-box 28 80 - -
Adu09g01264 318 ProSiteProfiles Zinc finger RING-type profile. 33 78 IPR001841 -
Adu09g01264 318 Pfam Ring finger domain 32 78 IPR001841 -
Adu09g01264 318 PANTHER PROTEIN, PUTATIVE-RELATED 137 318 - -
Adu09g01264 318 PANTHER PROTEIN, PUTATIVE-RELATED 21 137 - -
Adu09g01264 318 MobiDBLite consensus disorder prediction 299 318 - -
Adu09g01264 318 PANTHER OS09G0511500 PROTEIN 21 137 IPR044274 GO:0004842
Adu09g01264 318 CDD RING-H2 33 78 - -
Adu09g01264 318 MobiDBLite consensus disorder prediction 214 242 - -
Adu09g01264 318 MobiDBLite consensus disorder prediction 301 318 - -
Adu09g01264 318 SMART ring_2 33 77 IPR001841 -
Adu09g01264 318 PANTHER OS09G0511500 PROTEIN 137 318 IPR044274 GO:0004842
Adu09g01264 318 MobiDBLite consensus disorder prediction 169 200 - -
Adu09g01264 318 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 29 87 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g01264 Adu-Chr9 30080036 30088164 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g01264 29 79 C3H Transcription Factor Family AT1G53820 39.216 6.54e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g01264 - - adu:107465306 316.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g01264 09 30080036 30088164 Adu09g01264 09 30080036 30088164 ECH
Adu06g00424 06 5094524 5098947 Adu09g01264 09 30080036 30088164 PCT