Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g01260 ATGCTTGAAGAATTTGAATTCAATGCTACCAGCATTCCAACAATGCCACAGCTCCAACAGATACATGCACTCAGAAAAGCTCTATGGTCCTACTGTTTTCTTTCATCCCGAGGAAGTTTACTTACCGTAAAGCTTGGAATTGGGTTTCTGAATGATGCTACTAGAAGCAATTTGTATGTAGATTTTAGTACTCAGTACGAAGTTGTTGCAGCTGAATTTTCTTCTCCTCCCTCAACATCAGCTCTCTCATCTCTCATACCACTTTCACAGAAGCTCTCTCATCTCTCATATCTCATTGACGTGAACCTAAGTTTTCTCCTTCTATCGGCATCGGTCTCTCTCACTGTCTCCGACAAGCTTGTCGTCGGTCTCCTGCGGTCTCCGATCTCACGTGCCTTCCTTGCCCTCGTCGTCACTGGCGGTAGTAGCAATAGCTCCCGGACCTGGATGTTGTCGCCGCTCTATGTCTTGTCACTGCCTCGCAGTCAGTCTCGTGCCATCATTGCCCCCGTCGACGCTGAGACAGAAGCAGCAGGTTCCCGACTTCCTCCTCGCCTTCAGCAACTCCTCGGCTTCCTTCGCATAACATGGTCCCAATTTGGTGTGTCGGGTTCAGAGTTCGCAAGGGTGAAACAGCGCGTGGAAAAAGATAGAACACAATGCAGAAGGCAATTTTTTTGCAACAAGGAAGGAAAGAGAGCCAAGAAATACATCTCTAATTCGAATAGGAAGAGGGAGCATAAAGCACTGACTCGTACGGGTTGTGAAGCCATGCTTGCGGTGTACTTTGACACAAAAACTTCAGCTTGGAGAGTTAAAAAATTAGTTGAGAAGCACAACCTCGATCTTATCCTCCAATGTTTGGTACACCTAATTCAAAACCACCGTAGGATGACTGAGACTCAAAAAGTTCAGGCGAACATCATGCATGATAATGGTCTACCAACCTCTAAAATAATGGGACTAATGGTAGGCCAAGTCGGGGGTTATGCTATTGTTGGGTTCACAAAGAAGGATCCGGATAACCACAATGAAAGAACCCATCGTGAAAAGCTCATTGTAGCTGCAATTATTAAGGTGAAAAGAAGTGACAAAGGGATGTGGAAAGATATTGGGGATGCGAGACCTGGAGAAGAGATTAGAAGACTATCGCGATGTAGAGAGACATTGGAGATGCGAGACCTGGAGAAGAGGAAACAGCAGCAGTGA 1209 0.4599 MLEEFEFNATSIPTMPQLQQIHALRKALWSYCFLSSRGSLLTVKLGIGFLNDATRSNLYVDFSTQYEVVAAEFSSPPSTSALSSLIPLSQKLSHLSYLIDVNLSFLLLSASVSLTVSDKLVVGLLRSPISRAFLALVVTGGSSNSSRTWMLSPLYVLSLPRSQSRAIIAPVDAETEAAGSRLPPRLQQLLGFLRITWSQFGVSGSEFARVKQRVEKDRTQCRRQFFCNKEGKRAKKYISNSNRKREHKALTRTGCEAMLAVYFDTKTSAWRVKKLVEKHNLDLILQCLVHLIQNHRRMTETQKVQANIMHDNGLPTSKIMGLMVGQVGGYAIVGFTKKDPDNHNERTHREKLIVAAIIKVKRSDKGMWKDIGDARPGEEIRRLSRCRETLEMRDLEKRKQQQ 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g01260 402 Pfam Vacuolar protein sorting-associated protein 62 44 74 IPR009291 -
Adu09g01260 402 Pfam FAR1 DNA-binding domain 211 283 IPR004330 -
Adu09g01260 402 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 210 344 - -
Adu09g01260 402 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 210 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g01260 Adu-Chr9 30008253 30018443 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu09g01260 FAR1 1.7e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g01260 - - aip:107633598 236.498