Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g01251 ATGACGACCAACCTTGAAGAAAGTATAGAGGCAAAACGGAGAATCGCCGTCATAGGCATATCTACTGTCATACTAGTCGCTATGGTGGTGGCGGTTACCGTCGGTGTCAGTCAAGTCGACGGGGACGAAAAAAGCACGAAAAACACAAACCATGTGGCTTCGACGGTGAAAGCAGTGAAAGCCCTTTGCCAACCAACAGATTACAAGGAAGAGTGTGAGGAAAGCCTAACTGCCGAAGCTGGCAACACCACGGACCCAAGAGAACTTATCAAGATTGCATTTAATGTAACCATTAACAAGATTGGTGATGGGCTCCAGAAATCACATCTCTTGCAAGAGGTTGAGAAGGAACCTAGGGCCAAGATGGCGCTTGACACGTGTAAGCAGCTCATGAATCTCTCTATTAGCGAGTTTTCGAGGTCATTAGAGAGAATTGGACAGTTTAATCTCAACAACCTCGACGAAATCCTCACAAGCCTAAAGGTATGGCTTAGCGGAGCGGTGACATATCAAGAGACATGTTTGGATTGTTTTGAGAACACAACAAGCAAAGCTGGGGAAAAGATGAAGGAAGCGTTGACCAATGCGACGAAGATGAGCAGCAATGCCCTAAGCATAATCACGGAACTCGCAAATACTTTCTCAGAGTTGAACGAAACGCGGCAAGATAGCTCTCATCGTCGCCTCGAGGATGAGTTCCCATCGTGGGTTGACAATGGTGCTGGGGTACGTAGACTCCTTCTGTCGAGTTCACGCAAGCTGAAGCCCAATGTGATTGTGGCCAAAGATGGCAGCGCAAAGTTCACTAGCATCAATCAGGCTTTGAAGAATGTTCCTCAGAAAAACATGAAGCCATTTGTGATATTCATCAAGAAAGGTGTTTACAAAGAGTATGTTGAGGTTACCAGGGAGATGAGACATGTCGTCTTTGTTGGTGAAGGTGGCGATAAGACACGAATCACTGGCAACAAAAACTTCATTGATGGGACCAACACTTATAAAACTGCTACAGTAGCAATTCAAGGAGATTACTTTATCGCCATCAACATGGGGTTTGAGAACTCCGCAGGTGCCCATAAACATCAAGCAGTAGCAGTAAGGGTCCAAGCAGATAAGTCTATCTTTTACAAATGCTCGTTCGATGGCTACCAAGACACACTCTATGCTCACACCATGCGTCAATTCTACCGAGACTGCACCATCTCAGGCACCATCGATTTCATCTTCGGCGACGCCGTCACCGTCTTCCAAAACTGCACCTTCGTGGTCCGGAAGCCCATGCAGAACCAGCAATGCATCGTGACGGCGCAAGGCCGGAAGGAGAAGCACCAACCTTCAGGAATAGTAATCCACGGCGGCTCGATTGTGGCGGAGCCAGGAGAATCAAAGGACCACAAGAACGTGAAGTTCGATAGCAAGGCTTACTTAGCGCGTCCATGGAAGAATTACTCGAGGACGGTGTTCTTGCAAACATACATCGGAGATTTGATTGAACCCGAAGGGTACATGCCTTGGCAAGGGCCAGAAGGTAATACCGGCATGGATACTTGTTACTATGCAGAGTTCAATAACATTGGCCCTGGTTCAAATGCAACGAAGCGCGTGAAATGGCATGGTGTCAAGCACCTCACGGAAAAATCTGTAGGTGCTTTCTTCCCATCCAAGTTCTTCCATGGTGACGATTGGATTAGGTTTACTAAGGTTCCTTACTCCCCAGGCTTAACTAATTTCACGAAGCACAAAATTTAA 1749 0.4694 MTTNLEESIEAKRRIAVIGISTVILVAMVVAVTVGVSQVDGDEKSTKNTNHVASTVKAVKALCQPTDYKEECEESLTAEAGNTTDPRELIKIAFNVTINKIGDGLQKSHLLQEVEKEPRAKMALDTCKQLMNLSISEFSRSLERIGQFNLNNLDEILTSLKVWLSGAVTYQETCLDCFENTTSKAGEKMKEALTNATKMSSNALSIITELANTFSELNETRQDSSHRRLEDEFPSWVDNGAGVRRLLLSSSRKLKPNVIVAKDGSAKFTSINQALKNVPQKNMKPFVIFIKKGVYKEYVEVTREMRHVVFVGEGGDKTRITGNKNFIDGTNTYKTATVAIQGDYFIAINMGFENSAGAHKHQAVAVRVQADKSIFYKCSFDGYQDTLYAHTMRQFYRDCTISGTIDFIFGDAVTVFQNCTFVVRKPMQNQQCIVTAQGRKEKHQPSGIVIHGGSIVAEPGESKDHKNVKFDSKAYLARPWKNYSRTVFLQTYIGDLIEPEGYMPWQGPEGNTGMDTCYYAEFNNIGPGSNATKRVKWHGVKHLTEKSVGAFFPSKFFHGDDWIRFTKVPYSPGLTNFTKHKI 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g01251 582 ProSitePatterns Pectinesterase signature 2. 401 410 IPR033131 -
Adu09g01251 582 Pfam Pectinesterase 257 560 IPR000070 GO:0030599|GO:0042545
Adu09g01251 582 CDD PMEI-like_3 61 212 - -
Adu09g01251 582 SUPERFAMILY Pectin lyase-like 255 573 IPR011050 -
Adu09g01251 582 Pfam Plant invertase/pectin methylesterase inhibitor 58 206 IPR006501 GO:0004857
Adu09g01251 582 Gene3D - 251 574 IPR012334 -
Adu09g01251 582 TIGRFAM PME_inhib: pectinesterase inhibitor domain 49 210 IPR006501 GO:0004857
Adu09g01251 582 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 58 210 IPR035513 -
Adu09g01251 582 SMART PMEI_2 54 206 IPR006501 GO:0004857
Adu09g01251 582 Gene3D Invertase/pectin methylesterase inhibitor family protein 53 212 IPR035513 -
Adu09g01251 582 ProSitePatterns Pectinesterase signature 1. 282 301 IPR018040 -
Adu09g01251 582 PANTHER PECTINESTERASE 14 575 - -
Adu09g01251 582 PANTHER PECTINESTERASE 14 575 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g01251 Adu-Chr9 29473117 29477334 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g01251 1 574 Carbohydrate Esterase AT3G05610 50.865 0.0 619
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g01251 K01051 - gmx:100794799 787.719