Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g01250 ATGGCCACAAGAACTACCTTGAAGACTCCATTACCAACTACCTTCTTCACCCTTCTTTCCCTCTTGATATTCCTTTCTCCATCTCTTGCTAATGATGATTTCACTTCCTCTCCATGCAACCTCACACCCCACCCTACATTTTGCACTGCCACTCTACCCTCTCCCAATATTTTATCCGTACACGACCAATGCCGGTTCTTCCTTAACCAATCCTTAGTAATAACAAAGAAGATTCTCGAAATGGTCTCTTCTTATCTAAGAGACCGCCGAATGAGAATTCCGGGTTCCACTTTACATGCTATCGAAGACTGCGTCAACTCTGCAGAACTGAACATTGATTTCTTGTCCATTGTCCTCAGAGATGCCGAAAGAACCGCCGCAAATAGCTATCAAGCTCATTATTATGATACACAAACAATGCTTAGCGCCGTCTTAACCAATCATCAAACGTGTATGGACGGTTTTAACGAAGTAACTCCATATCCAAGAATCACCGGGGGATTATCAAGTGTACTGTCAAATGCATACAAGCTTTACAGCGTTTCGCTGGCGCTTTTCGCTCACGGTTGGGTTAAAAACCCGGCCGCAAGACCAAGAACTACCATGAACAGAAAGTTACACCAAACAAACTTAGACGGCGACGAAGGGTTGGTGGTGAGAGAGAAAGTTGTGGTGAATCCGAACGGATCTGGGGATTTCACCACCATAAATGATGCTGTGGATGCAGCACCTAACAATACCGGCACCAACAATGGGTACCATGTTATTTATGTTGTTGCTGGGATTTACAATGAGTACGTGTCCCTGTCGAAGAACAAGCAGAACGTAATGATTGTTGGAGATGGCATCAATCGCACCGTGATCACTGGCAATCGAAGCGTGGTTGATGGATGGACCACTTTCCAATCTGCAACATTCGCTGTAGCTGGAAAAGGGTTTGTAGCAGTGAACATAACATTTCGCAACACAGCGGGCCCCGCCAAGCACCAAGCAGTAGCTGTAAGAAACAGTGCAGATATGTCCACATTCTACACCTGCAGTTTCGAAGGCTATCAAGACACACTGTACACGCATTCTCTAAGACAATTCTACAAAAACTCTGACATTTACGGAACAGTTGACTTTATCTTCGGCAACGCTGCAACTTTGTTTCAAGACTGCAACATCTTTCCAAGACTACCCATGCAAAACCAATTCAACGCTATCACGGCGCAGGGCCGAATGGATCCGAACCAAAACACCGGAATTTCCATTCAGAACTCATGGATCGTTGGAAATGATGGGAACTACAGCAGGGTAGAAACGTATCTGGGAAGGCCTTGGAAGGAGTATTCAAGAACGGTTTACGTGCAGTGTTTCATGGATGGGATAGTTGATGGAAAAGGTTGGGTTGAGTGGAATGGGGATTTTGCATTGAGGACCTTGTATTTTGCGGAATTTGCTAATTGGGGTCCAGGTTCAAATACTACTAATAGGGTCACTTGGGAAGGGTACCATCTGGTGGATGAAAATGATGCAGATGGTTTCACTGTGTACAATTTCATACAAGGTGATTCATGGTTGCCCAAGACTGGAGTGCCCTTCAAAGCTGGGTTATAG 1599 0.4503 MATRTTLKTPLPTTFFTLLSLLIFLSPSLANDDFTSSPCNLTPHPTFCTATLPSPNILSVHDQCRFFLNQSLVITKKILEMVSSYLRDRRMRIPGSTLHAIEDCVNSAELNIDFLSIVLRDAERTAANSYQAHYYDTQTMLSAVLTNHQTCMDGFNEVTPYPRITGGLSSVLSNAYKLYSVSLALFAHGWVKNPAARPRTTMNRKLHQTNLDGDEGLVVREKVVVNPNGSGDFTTINDAVDAAPNNTGTNNGYHVIYVVAGIYNEYVSLSKNKQNVMIVGDGINRTVITGNRSVVDGWTTFQSATFAVAGKGFVAVNITFRNTAGPAKHQAVAVRNSADMSTFYTCSFEGYQDTLYTHSLRQFYKNSDIYGTVDFIFGNAATLFQDCNIFPRLPMQNQFNAITAQGRMDPNQNTGISIQNSWIVGNDGNYSRVETYLGRPWKEYSRTVYVQCFMDGIVDGKGWVEWNGDFALRTLYFAEFANWGPGSNTTNRVTWEGYHLVDENDADGFTVYNFIQGDSWLPKTGVPFKAGL 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g01250 532 Gene3D - 217 532 IPR012334 -
Adu09g01250 532 SMART PMEI_2 30 185 IPR006501 GO:0004857
Adu09g01250 532 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 17-RELATED 19 531 - -
Adu09g01250 532 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 188 IPR035513 -
Adu09g01250 532 TIGRFAM PME_inhib: pectinesterase inhibitor domain 15 185 IPR006501 GO:0004857
Adu09g01250 532 CDD PMEI-like_3 39 190 - -
Adu09g01250 532 Pfam Pectinesterase 223 518 IPR000070 GO:0030599|GO:0042545
Adu09g01250 532 ProSitePatterns Pectinesterase signature 2. 369 378 IPR033131 -
Adu09g01250 532 Pfam Plant invertase/pectin methylesterase inhibitor 36 185 IPR006501 GO:0004857
Adu09g01250 532 SUPERFAMILY Pectin lyase-like 220 531 IPR011050 -
Adu09g01250 532 PANTHER PECTINESTERASE 19 531 - -
Adu09g01250 532 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 36 187 IPR035513 -
Adu09g01250 532 Coils Coil 105 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g01250 Adu-Chr9 29450679 29454485 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g01250 6 532 Carbohydrate Esterase AT4G02330 49.562 0.0 532
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g01250 K01051 - gmx:100810329 731.865