Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g01229 ATGGCAACAACCCTTACAAGTAACAAGGTAGAACTTGATGTGGAGGGTGTGTTGCACTTCAAGTGGCGTCTTCACAAGAGAGCAGCGCAAGTTCTCTACTTACAGTTTGCCCTGCGGAAACGTGTACTAATTGAACAACTTCATGACAAACAAGAGCAGATAAAAGAATGGCTTCAGAGCTTAGGAATAGTAGATCACACAGTGACGATACACGATGATGAAGAACCTGATGATGGAGCTGTGCCTTTACATCACGAAGACAGTGTTAAAAGCAGATATGTCCCATCTGTTGCTGCTCTATCAATAATTCGTCCATCATTAGGAGGGCAGCAATCGGTTGTAGACAGGGCAAAAGTCGCAATGCAAAGTTATTTGAATCTTTTCTTAGAAAACCTGGATATTGTTAATTCTCCAGAGGTCTGCAGGTTTTTGGAAGTCTCCAAGCTATCCTTTTTACATGAGTATGGTCCAAAGCTGAGAGAGGGATATGTGACAGTGAAGCATTTATCAAATGTTTCACAGGATTCAGAAGCATGCCATCCATGTGATTGGCTTCGTGGCTGTAATAACAGCTGGAAGAAGGTATGGGCTGTTTTGAAACATGGATTTTTGGCCTTGCTGGATGGCCCTTTCAGCAATATACCGCTGGACATACTTGTTTTTGATGTTCTTCCATCCTCAAAAGGAGATAAAACACAAATACATTTAGCTGATCCTGTAAAGGAATGTAATCCTTTGCGATACACATTTAAGGTTACTAGTGGGAATAGGACCATATCATTGAGAACTACCAGCAATGGTAGGGTTAAAGCTTGGGTAAATGCAATTAATGAAGCTGGTCTTCGACCTTCGGAGGGTTGGTGTCGTCCTCATCGGTTTGCTTCATTTGCTCCTGTAAGAGGTTTGACTGAAGATGGGAGCCAAGCCCAGTGGTTTGTAGACGGAAAGGCAGCATTTCAAGCAATTGCTTCTTCAATTCAAGCTGCAAAATCAGAGATCTTCATTACAGGATGGTGGCTTTGCCCCGAGCTATATCTTAAACGTCCTTTTGATGGCTTTTCAAAACTCAGACTTGACTCGTTGCTAGAAGAAAAAGCTATGCAAGGAGTTCAGATATATGTGCTTCTCTACAAGGAGGTTTCTCTGGCTTTGAAAATCAACAGCTCGTATAGTATGAGAAGACTCCTCAAAATTCATGAGAATGTGAGGGTATTGCGCTATCCTGACCATTTAACCAGTGGCGTGTATTTATGGTCGCACCATGAGAAACTTGTAATTGTTGATTACAAGATTTGCTATATTGGAGGATTAGACTTATGCTTCGGTCGATATGACACGCCTGACCATAAAGTTGGTGATTGCCCCTCTATTACATGGCCTGGAAAGGACTATTACAACCCAAGAGAATCTGAACCAAATTCATGGGAAGACACGATGAGAGATGAATTGGATCGTGAGAAATATCCTCGTATGCCATGGCATGATGTCCATTGTGCCCTTTGGGGACCTCCTTGTCGTGATATTGCTCGACATTTCATTCAACGTTGGAACCATGCTAAGAGAACTAAAGCTCCAAATGAGCATGAAATCCCGCTACTTATGCCTCACCATCACATGGTCCTCCCTCATTACATGGGAAAAAGCAAAGATATGGACATTACTGGAAAGAAAGATGAAGATGGCACGAAAGAACTTGAGAGTAAGGATTCATTTTCGGAGTCTCCGGTACAAGATATACCGCTGCTTTTACCTCAAGAATCTGGTGGACTAGTTACTTCGCTCGGAGATCATTCCAATATTAGTGAAAAGGTTCCATTATCATCCCAAAAGTTGGAAAATGAAACATCAACTCCAAACACAAAGATCAATGGGTTTCATGATGAAGTTGTTCCTTTTGACCTTGGTGCACAATCTGTTGTTTATGATCTAGACGATTGGTGGGAAACACCAGATGAAGGTACCAAACACGATAATAATTTGGAATATAGACAAGTTGGTCCACGTACTTCTTGTCGCTGTCAGGTAATCAGAAGTGTCGGCCAATGGTCAGCTGGAACCAGTCAGCATGAAGAAAGCATTCACACAGCATATTGTTCTCTTATTGAAAAAGCAAAGCATCTTATCTACATTGAGAACCAATTTTTCATATCAGGTCTAGCAAAGGATGATACAATTCAGAACCGTGTATTGGAAGCACTATACAGGCGCATTTTACAAGCACACAAGGAACAGAATAAATTTAGAGTTATAGTTGTGATGCCCCTCTTGCCTGGGTTCCAAGGTGGTCTTGATGATGGTGGTGCTGCAACTGTCAGGGCTTTAACACATTGGCAGTATAGAACAATTTCAAGGGAAAAGCATTCTATATTACACAATCTTGAAGCTAAAATTGGTCCTAAGGCTCATGATTATATTTCTTTCTATGGTCTACGATCTCATGGTAGACTTCATGCCGATGGTTACGTGGCCACAAGTCAGGTATATGTGCATAGTAAATTGATGATAATAGATGACCGTGTAGCTGTCATCGGATCATCTAACATTAACGACCGTAGTCTGCTTGGGTTAAGAGACTCTGAGATAGGAGTGGTTATAGAAGACAAGGAATATGTTGAATCATTGATGAATGGAAAACCATGGAAAGCTGGGAAATTTTCTTATAGCCTCCGTTGTTCCTTATGGTCTGAACACCTTGGCCTTCATACAGAAGAGGTCAGTAAAATCAGTGATCCATTGGCAGACACAACATACAAGGACTTGTGGTCAGCAACTGCGAAGGAGAATACTAGGATATATGATGAGGTCTTCGGTTGCATTCCGAATGATCAGATACACTCAAGATCTGCTCTTCGACAGAGCATGACTCAGCGGAAAGAAAAGGTGGGTCACACCACCATAGATTTGGGAATAGCCCCTGATAAATTAATAACTAGTGATGTCTATGGAGAAATCAATGAGACAAATTCAATGGATAGATTGAACTCTGTAAAGGGACATCTTGTTTCCTTTCCTTTGGAGTTCATGCGTGATGAAGATCTAAGACCAGCCTTTATTGAGATTTTGTCGCGATGA 3072 0.415 MATTLTSNKVELDVEGVLHFKWRLHKRAAQVLYLQFALRKRVLIEQLHDKQEQIKEWLQSLGIVDHTVTIHDDEEPDDGAVPLHHEDSVKSRYVPSVAALSIIRPSLGGQQSVVDRAKVAMQSYLNLFLENLDIVNSPEVCRFLEVSKLSFLHEYGPKLREGYVTVKHLSNVSQDSEACHPCDWLRGCNNSWKKVWAVLKHGFLALLDGPFSNIPLDILVFDVLPSSKGDKTQIHLADPVKECNPLRYTFKVTSGNRTISLRTTSNGRVKAWVNAINEAGLRPSEGWCRPHRFASFAPVRGLTEDGSQAQWFVDGKAAFQAIASSIQAAKSEIFITGWWLCPELYLKRPFDGFSKLRLDSLLEEKAMQGVQIYVLLYKEVSLALKINSSYSMRRLLKIHENVRVLRYPDHLTSGVYLWSHHEKLVIVDYKICYIGGLDLCFGRYDTPDHKVGDCPSITWPGKDYYNPRESEPNSWEDTMRDELDREKYPRMPWHDVHCALWGPPCRDIARHFIQRWNHAKRTKAPNEHEIPLLMPHHHMVLPHYMGKSKDMDITGKKDEDGTKELESKDSFSESPVQDIPLLLPQESGGLVTSLGDHSNISEKVPLSSQKLENETSTPNTKINGFHDEVVPFDLGAQSVVYDLDDWWETPDEGTKHDNNLEYRQVGPRTSCRCQVIRSVGQWSAGTSQHEESIHTAYCSLIEKAKHLIYIENQFFISGLAKDDTIQNRVLEALYRRILQAHKEQNKFRVIVVMPLLPGFQGGLDDGGAATVRALTHWQYRTISREKHSILHNLEAKIGPKAHDYISFYGLRSHGRLHADGYVATSQVYVHSKLMIIDDRVAVIGSSNINDRSLLGLRDSEIGVVIEDKEYVESLMNGKPWKAGKFSYSLRCSLWSEHLGLHTEEVSKISDPLADTTYKDLWSATAKENTRIYDEVFGCIPNDQIHSRSALRQSMTQRKEKVGHTTIDLGIAPDKLITSDVYGEINETNSMDRLNSVKGHLVSFPLEFMRDEDLRPAFIEILSR 1023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g01229 1023 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 416 443 IPR001736 GO:0003824
Adu09g01229 1023 Gene3D Endonuclease Chain A 647 889 - -
Adu09g01229 1023 Gene3D Endonuclease Chain A 302 538 - -
Adu09g01229 1023 Gene3D - 160 284 IPR011993 -
Adu09g01229 1023 PIRSF PLD_euk 1 1022 IPR016555 GO:0004630|GO:0006654|GO:0048017
Adu09g01229 1023 SUPERFAMILY Phospholipase D/nuclease 663 875 - -
Adu09g01229 1023 ProSiteProfiles PH domain profile. 157 281 IPR001849 -
Adu09g01229 1023 MobiDBLite consensus disorder prediction 548 579 - -
Adu09g01229 1023 PANTHER PHOSPHOLIPASE D 10 1019 IPR015679 -
Adu09g01229 1023 Pfam Phospholipase D Active site motif 416 443 IPR001736 GO:0003824
Adu09g01229 1023 MobiDBLite consensus disorder prediction 602 624 - -
Adu09g01229 1023 PANTHER PHOSPHOLIPASE D ZETA 2 10 1019 - -
Adu09g01229 1023 MobiDBLite consensus disorder prediction 548 571 - -
Adu09g01229 1023 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 825 852 IPR001736 GO:0003824
Adu09g01229 1023 SUPERFAMILY Phospholipase D/nuclease 265 536 - -
Adu09g01229 1023 CDD PLDc_vPLD1_2_yPLD_like_1 309 454 - -
Adu09g01229 1023 CDD PH_PLD 135 279 - -
Adu09g01229 1023 MobiDBLite consensus disorder prediction 602 623 - -
Adu09g01229 1023 CDD PLDc_vPLD1_2_yPLD_like_2 685 869 - -
Adu09g01229 1023 SMART pld_4 416 443 IPR001736 GO:0003824
Adu09g01229 1023 SMART pld_4 825 852 IPR001736 GO:0003824
Adu09g01229 1023 SMART PH_update 158 283 IPR001849 -
Adu09g01229 1023 Pfam PLD-like domain 698 872 IPR025202 -
Adu09g01229 1023 SUPERFAMILY PH domain-like 187 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g01229 Adu-Chr9 27723181 27739401 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g01229 19 1019 Phospholipase D Gene Family (Wang group) AT3G05630 65.054 0.0 1307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g01229 K01115 - gmx:100796914 1663.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g01229 09 27723181 27739401 Adu09g01229 09 27723181 27739401 ECH