Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g01228 ATGGAGACATCGTTCCGTCGCTGCTCCATGCCGCACTGCTGCCTCTCCTCCATGCCGCATCATCGTCTCTCCATCTCTCCTGAAGCCTGTGAAGTGCCATCGCTATCCCCGCCCCTGCTCCCCACAGCGGCACTGTGTCTCTATTTCCAACAGCCGCTCACTCTTGACGAAGGCATTCCATTGCGATGTATCCATGTGGTAGACGGCAACTTTAACTCTGCTTCCATTAGCATCCTCCAGAGGCATCATAAAAACTATGATAGTTTTTGTCTTGTGGCAATAAAATGCGACATAAGGATAATTCCGTTTATAGTACACAACAGTGATCTCATGAAAAAAAAGAGCCTCAAAAACTGTTACAACGGGAAGAACCTCTTAACAGCTGAAAAGTGGTGGCTCAACAGTAGCATTACTAATTTCTTCAAAGTTTTGATGGGTCATCTTTCTTCAATGTTCAATGGTTTGGCAAAATCACTGGCAATTAAGAAATGGAGGAATTCAGAAAGATGCAGCGGAAGAGAAGCGGCGGAAGCGATGGCAAAGGAAGCAAAAAAGAATGAGTTCTTGTTATGTAGCTCAGGCACTGTTAGTGTTGATGGCTCAAACAACTTTGCCTCAGTTTTCTCCAAAAGAGGCAAGAAAGGAGTCAATCAAGATTGCTGCATAGTCTGGGAAGAATTTGGGTGCCAAGAGGACACGATCTTCTGTGGGATCTTTGATGGGCATGGGCCATGGGGTCACTTTGTGGCGAAAAGAGTGAGAGAATCAATGCCGCCATATTCTGGAGATGCCGATGTTGAGGCAGAGAAGATGCAAAACTGTTTTAACATATGGAAGCATTCCTACTTGAAGACTTGTGCTGCCATTGATCGAGAACTCCAGCAGAATCGCAAGATCGATTCGTTTTTCAGTGGAACCACTGCCCTCTCCATTGTTAGACAGGGAGAACTAATTGTGATTGCAAACGTTGGTGACTCGCGTGCTGTATTAGCTACAACATCGGATCATGGGAGTTTGGTACCAATTCAGCTCACAGTAGATTTCAAGCCCAATCTACCTCAGGAAGCAGCTCGAATACTGGAGCGCCAAGGGCGAGTCTTTTGCTTAGAAGACGAGCCGGGGGTGCACAGGGTATGGCTTCCCGACGAAGAGTCGCCGGGGCTGGCCATGTCTAGGGCACTTGGTGACTACAGCGTCAAAGAGTATGGCCTAATCTCGGTGCCTGAGGTAACCCAATGGAACGTAACCACCAGAGACCAGTTTGTTGTGCTAGCTACTGATGGGGTGTGGGATGTAATATCGAACGAAGAAGCGGTGGAGATTGTATCTTCAACAGCAGAGAGAGGAAAGTCAGCAAAACGTTTGGTGGAGTGTGCGAAGCGTTCATGGAAACGCAAGAGGGGTGGAATTGCCATGGATGACATCTCTGCCATTTGTCTTTTCTTTCACTCTCCTTGTAACCTTCTTGATAACCAACTTGCCACCCTAAACTAA 1494 0.4712 METSFRRCSMPHCCLSSMPHHRLSISPEACEVPSLSPPLLPTAALCLYFQQPLTLDEGIPLRCIHVVDGNFNSASISILQRHHKNYDSFCLVAIKCDIRIIPFIVHNSDLMKKKSLKNCYNGKNLLTAEKWWLNSSITNFFKVLMGHLSSMFNGLAKSLAIKKWRNSERCSGREAAEAMAKEAKKNEFLLCSSGTVSVDGSNNFASVFSKRGKKGVNQDCCIVWEEFGCQEDTIFCGIFDGHGPWGHFVAKRVRESMPPYSGDADVEAEKMQNCFNIWKHSYLKTCAAIDRELQQNRKIDSFFSGTTALSIVRQGELIVIANVGDSRAVLATTSDHGSLVPIQLTVDFKPNLPQEAARILERQGRVFCLEDEPGVHRVWLPDEESPGLAMSRALGDYSVKEYGLISVPEVTQWNVTTRDQFVVLATDGVWDVISNEEAVEIVSSTAERGKSAKRLVECAKRSWKRKRGGIAMDDISAICLFFHSPCNLLDNQLATLN 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g01228 497 Pfam Protein phosphatase 2C 221 455 IPR001932 -
Adu09g01228 497 CDD PP2Cc 203 482 IPR001932 -
Adu09g01228 497 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 145 485 - -
Adu09g01228 497 SMART PP2C_4 195 480 IPR001932 -
Adu09g01228 497 SUPERFAMILY PP2C-like 198 484 IPR036457 -
Adu09g01228 497 Gene3D - 196 484 IPR036457 -
Adu09g01228 497 PANTHER ALPHABET, ISOFORM E-RELATED 145 485 - -
Adu09g01228 497 ProSiteProfiles PPM-type phosphatase domain profile. 204 482 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g01228 Adu-Chr9 27525100 27538349 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g01228 145 483 PP2C-type Phosphatase Gene Family AT3G05640 68.286 1.61e-175 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g01228 - - gmx:100793051 567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g01228 09 27525100 27538349 Adu09g01228 09 27525100 27538349 ECH
Adu01g00600 01 8209826 8211747 Adu09g01228 09 27525100 27538349 PCT