Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g01217 ATGTCGTATCGCCCAACCGGAAACTCAAGGACCGATGTCCGCCGGAGCCGCTACAAGGTGGCTGTCGACGCCGAGGAGGGTCGCCGGCGGCGAGAAGACACCATGGTGGAGATCAGGAAGAACCGAAGGGAAGAGAGCTTACAGAAGAAGCGGCGCGAGGGTCTCCAAGCACAGCAGATTCCCGCTTCGGCACAATCCACTGTGCTAGAGAAGAAGTTGGAACACCTACCTACGATGGTTGCAGGTGTTTATTCTGATGATAATAGCCTTCAGCTGGAAGCAACTACTCAGTTCCGGAAGTTGCTTTCGATTGAGCGCTGTCCGCCGATTGAGGAGGTTATACAGGCTGGTGTCGTTTCTCGCTTTGTTGAATTTCTTTCGAGGGATGATTTCCCCCAGTTGCAGTTCGAGGCAGCTTGGGCTTTGACAAATATAGCTTCTGGAACATCTGAAAACACCAAGGTGGTAATTGATCATGGGGCTGTCCCCATTTTTGTAAGGCTCCTTGCTTCACCCAGTGACGACGTCCGTGAACAGGCAGTGTGGGCATTAGGAAATGTTGCTGGGGATTCTCCCAGATGCCGTGATCTTGTACTCAGTCATGGTGCTCTGCTTCCTCTGTTGGCGCAATTGAATGAACATGCCAAACTTTCCATGCTTAGGAATGCTACCTGGACACTTTCAAACTTCTGCAGGGGCAAGCCACAGCCTCCTTTTGATCAGGTTAAACCTGCACTTCCTGCCCTTGCTAGTCTTATCCATTCAAATGATGAAGAAGTCTTGACCGATGCTTGTTGGGCACTTTCATATCTTTCTGATGGTACAAACGACAAAATTCAAGCTGTAATTGAAGCTGGTGTCTGTCCCCGGCTAGTTGAACTTTTAATGCACCCATCCCCTTCAGTTCTAATTCCTGCTCTTCGTACTGTTGGAAATATTGTCACTGGAGATGATATGCAAACTCAGGTTATCATCAACCATCAAGCACTTCCTTGCCTTCTTAATTTGTTGTCTAATACTTATAAAAAAAGCATCAAGAAGGAAGCTTGTTGGACCATATCAAACATCACAGCTGGTAATAAACAGCAGATTCAGGCCGTAATTGAGTCTAATATAATTGGTCCTTTGGTCAGCCTGCTTCAAAATGCTGAGTTTGACATCAAGAAAGAGGCGGCTTGGGCTATATCAAATGCTACATCTGGTGGATCTCACGAACAAATCAAGTACCTGGTAAGCCAGGGGTGCATCAAGCCCTTGTGTGATCTTCTCATCTGTCCAGATCCTAGAATTGTGACAGTTTGTCTGGAAGGACTTGAAAACATCTTGAAGGTGGGTGAAGCTGATAAAAATATGGGCAATACTGGTGATGTGAATCTGTATGCCCAAATGATTGACGATGCTGAGGGTTTGGAGAAAATTGAGAACCTCCAGAGTCATGATAACACAGAGATCTATGAAAAGGCAGTGAAGATTCTTGAAACATACTGGTTGGAGGAAGATGACGAGACTATGCCTCCAGGGGATGGTTCCCAAGCAGGGTTCAACTTTGGTGGCTCTGATGGTCCTGCTGTGCCACCTGGTGGATTCAACTTTTAA 1596 0.4687 MSYRPTGNSRTDVRRSRYKVAVDAEEGRRRREDTMVEIRKNRREESLQKKRREGLQAQQIPASAQSTVLEKKLEHLPTMVAGVYSDDNSLQLEATTQFRKLLSIERCPPIEEVIQAGVVSRFVEFLSRDDFPQLQFEAAWALTNIASGTSENTKVVIDHGAVPIFVRLLASPSDDVREQAVWALGNVAGDSPRCRDLVLSHGALLPLLAQLNEHAKLSMLRNATWTLSNFCRGKPQPPFDQVKPALPALASLIHSNDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLMHPSPSVLIPALRTVGNIVTGDDMQTQVIINHQALPCLLNLLSNTYKKSIKKEACWTISNITAGNKQQIQAVIESNIIGPLVSLLQNAEFDIKKEAAWAISNATSGGSHEQIKYLVSQGCIKPLCDLLICPDPRIVTVCLEGLENILKVGEADKNMGNTGDVNLYAQMIDDAEGLEKIENLQSHDNTEIYEKAVKILETYWLEEDDETMPPGDGSQAGFNFGGSDGPAVPPGGFNF 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g01217 531 Pfam Armadillo/beta-catenin-like repeat 149 188 IPR000225 GO:0005515
Adu09g01217 531 Pfam Armadillo/beta-catenin-like repeat 245 272 IPR000225 GO:0005515
Adu09g01217 531 Pfam Armadillo/beta-catenin-like repeat 276 314 IPR000225 GO:0005515
Adu09g01217 531 Pfam Armadillo/beta-catenin-like repeat 318 358 IPR000225 GO:0005515
Adu09g01217 531 Pfam Armadillo/beta-catenin-like repeat 360 399 IPR000225 GO:0005515
Adu09g01217 531 Pfam Armadillo/beta-catenin-like repeat 191 232 IPR000225 GO:0005515
Adu09g01217 531 Pfam Armadillo/beta-catenin-like repeat 404 441 IPR000225 GO:0005515
Adu09g01217 531 Pfam Armadillo/beta-catenin-like repeat 108 147 IPR000225 GO:0005515
Adu09g01217 531 SMART arm_5 149 189 IPR000225 GO:0005515
Adu09g01217 531 SMART arm_5 360 400 IPR000225 GO:0005515
Adu09g01217 531 SMART arm_5 234 273 IPR000225 GO:0005515
Adu09g01217 531 SMART arm_5 403 443 IPR000225 GO:0005515
Adu09g01217 531 SMART arm_5 317 358 IPR000225 GO:0005515
Adu09g01217 531 SMART arm_5 275 315 IPR000225 GO:0005515
Adu09g01217 531 SMART arm_5 106 147 IPR000225 GO:0005515
Adu09g01217 531 SMART arm_5 190 232 IPR000225 GO:0005515
Adu09g01217 531 SUPERFAMILY ARM repeat 16 501 IPR016024 -
Adu09g01217 531 MobiDBLite consensus disorder prediction 40 59 - -
Adu09g01217 531 Pfam Atypical Arm repeat 458 504 IPR032413 -
Adu09g01217 531 PANTHER IMPORTIN SUBUNIT ALPHA 4 522 - -
Adu09g01217 531 Pfam Importin beta binding domain 14 96 IPR002652 GO:0006606|GO:0061608
Adu09g01217 531 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 117 160 IPR000225 GO:0005515
Adu09g01217 531 PANTHER IMPORTIN ALPHA 4 522 - -
Adu09g01217 531 Gene3D - 13 52 IPR036975 GO:0006606
Adu09g01217 531 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 160 202 IPR000225 GO:0005515
Adu09g01217 531 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 244 286 IPR000225 GO:0005515
Adu09g01217 531 PIRSF Importin_alpha 6 531 IPR024931 GO:0005737|GO:0006606|GO:0061608
Adu09g01217 531 Gene3D - 74 497 IPR011989 -
Adu09g01217 531 ProSiteProfiles IBB domain profile. 1 60 IPR002652 GO:0006606|GO:0061608
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g01217 Adu-Chr9 26826575 26831894 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g01217 239 465 U-box Gene Family AT2G23140 23.684 1.17e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g01217 K15042 - gmx:100789135 998.423